Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01487 ATGACAATGATTAACTGTAACTCTGAATGGCGAAATATATCAGCTACATGGAGCGGAGATAACAGCGTAAATGATTGTTTGAGTGACACATCTTCTTTTGCTTATGGCATATTTTCCAGGATTGTACCACTTATTACAGAAACTTATAGTGTGATGGACAAACATATATTTTCTCTATTTTGGGGATTCCAGAAAACCGCTACTTTAGCTATAAATCTTTCACCAATCTATTTTCCGTGGGAAGTCCGATTCACATGGTTCATCACTGGAGTAGGATTATTTCTTCATGTGTATCTAATTATTAACATGCAGAAATTTACATCTGACCTTCAACAAAGGACGCTAGAAATGCAGGTTAGACGTCATTATGTTGAGGAAAGGATGAGGCATCGTCGATATCTAGAAGGTCTCAGAAGGAGATGGTTATGA 429 0.3706 MTMINCNSEWRNISATWSGDNSVNDCLSDTSSFAYGIFSRIVPLITETYSVMDKHIFSLFWGFQKTATLAINLSPIYFPWEVRFTWFITGVGLFLHVYLIINMQKFTSDLQQRTLEMQVRRHYVEERMRHRRYLEGLRRRWL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01487 142 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01487 Vivi-Chr6 66475552 66476552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01487 17 139 Ion Channels AT3G17690 43.089 9.57e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01487 K05391 - vvo:131611602 264.618