Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01462 ATGCACGCTGATTCACATAAGAGTGAGTGTAACATGTACTGTTTGGATTGTATGAATGGTGCTCTTTGTTCTCTGTGTCTCAATTATCATAAAGATCATCGCGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATTTCCGGGGTTCAAACATATATTATCAACAGTGCTAGGGATGTGTTCTTGAATGAGAGACCTCTGCCAAGGCCCGGCAAAGGCGTCACCAACACTTGCGAAGTCTGCGAGCGCATCCTTCTCGACTCGTTTCGATTTTGTTCTCTTGGTTGCAAGCTATGGTTATTCAGAAATGAACATTCAACTTGCTGA 363 0.4298 MHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARDVFLNERPLPRPGKGVTNTCEVCERILLDSFRFCSLGCKLWLFRNEHSTC 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01462 120 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 109 - -
Vivi6g01462 120 Pfam PLATZ transcription factor 39 110 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01462 Vivi-Chr6 64299813 64302944 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi6g01462 PLATZ 3.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01462 - - vvo:131611589 233.417