Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01461 ATGCACGCTGATTCACATAAGAGTGAGTGTAACATGTACTGTTTGGATTGTATGAATGGTGCTCTTTGTTCTCTGTGTCTCAATTATCATAAAGATCATCGCGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATTTCCGGGGTTCAAACATATATTATCAACAGTGCTAGGGATGTGTTCTTGAATGAGAGACCTCTGCCAAGGCCCGGCAAAGGCGTCACCAACACTTGCGAAGTCTGCGAGCGCATCCTTCTCGACTCGTTTCGATTTTGTTCTCTTGGTTGCAAGAGCAAAATCTCAGAGCAAAGTTGGGGATTTCTTCTCAGAATCCAACTATTCCGGGAGAGGACGAAGCTAGTAGTCCACAAATGA 411 0.4404 MHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARDVFLNERPLPRPGKGVTNTCEVCERILLDSFRFCSLGCKSKISEQSWGFLLRIQLFRERTKLVVHK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01461 136 Pfam PLATZ transcription factor 39 109 IPR006734 -
Vivi6g01461 136 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01461 Vivi-Chr6 64299813 64302947 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi6g01461 PLATZ 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01461 - - vvo:131611589 285.804