Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01439 ATGGATATCGTGGTAGTGGATTCGGACAAGGGAAACGAGGCAGATCGTAGCTGTTTAGAAGAGAGTACAAGTATATTTGATGGAGTCGAAGTTCAAGAGCCATATGTGGGCATGGAATTTGATTCTGAAGAAGCTGCCAGGACATTTTATGTTGAATATGCTAGACGGGTAGGATTTCTTGTACGCGTTATGCAACGTCGCCGTTCTGGAATCGATGGCAGAACTCTTGCTCGTCGACTTGGGTGTAACAAACAAGGATTCTCACCCAGTAGCAAGGGAACACTGGGGCAAGAAAAAAGACCAAGGTCCAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTAGTTAAAATGGAAAAATCTGGAAAATGGATTGTCACAAGATTTATAAAGGATCACAACCATCCACTAATTGCTACAGCTAATGGTTTCAGTACAGAGGACGATAAAGATAAGAAAATTGCTGAACTTACTATGGAGTTGGAGCGTCAAGATGAACTTTGTACTGCATATAGAGAAAAGCTACTCAGCTTCATTAACAATGTTGAAGAAGAAACAGAGGAAATGTCCACAAAAATTCAACTAATTATTGAAAATATAAGGAGAGCTGAGTCTGAAATGCAAAATTGTTCCCAGAATAGAAAGCCTCGGGACTGTACTTGA 660 0.4076 MDIVVVDSDKGNEADRSCLEESTSIFDGVEVQEPYVGMEFDSEEAARTFYVEYARRVGFLVRVMQRRRSGIDGRTLARRLGCNKQGFSPSSKGTLGQEKRPRSSAREGCKATILVKMEKSGKWIVTRFIKDHNHPLIATANGFSTEDDKDKKIAELTMELERQDELCTAYREKLLSFINNVEEETEEMSTKIQLIIENIRRAESEMQNCSQNRKPRDCT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01439 219 MobiDBLite consensus disorder prediction 83 107 - -
Vivi6g01439 219 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Vivi6g01439 219 Coils Coil 153 173 - -
Vivi6g01439 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 203 - -
Vivi6g01439 219 Coils Coil 178 212 - -
Vivi6g01439 219 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01439 Vivi-Chr6 61828880 61834080 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi6g01439 FAR1 2.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01439 - - mtr:112416292 377.867