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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi6g01387
ATGGCTACTGAATATCCTAAGGCGAACAAGCCAATCCAGTTTTTCAGGGTCATAGTTACTGAAAATCCTTCACATGGAAAGCTTGTAAAACCTTGTATGTTACGAATAAAGTTTGTGAAGAAATATGGACAAGGTTTAGCAAAAGTTATTTGTCTAAAGACTTCCAATGGGGAAAATTGGAAAATAAATTTGGTGATCAATCATGGCAAAATATGGTTTGGAAAAGGTTGGAAGGAATTTGCACAGTATTATTTTCTAGGTCATGGCCATTTTCTGGTTTTTAAATATCAAAGACATTCTAAATTTCATGTAGACATCTTTGATAATAAGTCTACGCTAGAGATAGATTACCCTCCCATAAGAGTTGAAGCGGAAAAGGTTTCTGAAAATAATGAAGATTTTAGAACAAGTAAGAAGCGAAAAGCAAACTCTTCCTTTGAATTTGGAAGCACTGGTTGTGCCAAGCATCATACTCACAAAAGGAGCAAAGAGTCTTCTCAACAAAATGATGAAGCTACTCAAGGATAA
528
0.3485
MATEYPKANKPIQFFRVIVTENPSHGKLVKPCMLRIKFVKKYGQGLAKVICLKTSNGENWKINLVINHGKIWFGKGWKEFAQYYFLGHGHFLVFKYQRHSKFHVDIFDNKSTLEIDYPPIRVEAEKVSENNEDFRTSKKRKANSSFEFGSTGCAKHHTHKRSKESSQQNDEATQG
175
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi6g01387
175
MobiDBLite
consensus disorder prediction
128
142
-
-
Vivi6g01387
175
ProSiteProfiles
B3 DNA-binding domain profile.
50
110
IPR003340
GO:0003677
Vivi6g01387
175
MobiDBLite
consensus disorder prediction
128
175
-
-
Vivi6g01387
175
Pfam
B3 DNA binding domain
33
109
IPR003340
GO:0003677
Vivi6g01387
175
SUPERFAMILY
DNA-binding pseudobarrel domain
21
109
IPR015300
-
Vivi6g01387
175
PANTHER
B3 DOMAIN-CONTAINING
9
165
-
-
Vivi6g01387
175
CDD
B3_DNA
14
108
IPR003340
GO:0003677
Vivi6g01387
175
SMART
B3_2
14
110
IPR003340
GO:0003677
Vivi6g01387
175
Gene3D
-
7
111
IPR015300
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi6g01387
Vivi-Chr6
57837846
57839377
Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi6g01387
13
133
B3 DNA Binding Superfamily
AT4G01580
36.585
1.12e-16
72.0
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Vivi6g01387
B3
1e-11
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi6g01387
-
-
vvo:131609182
370.163
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