Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01363 ATGGCTAAAAAAGATGAAGGATATGCCGTTGGAATAGACCTTGGAACTACGTACTCATGTGTTGGTGTGTGGCAAGAACAGCATGGTAGAGTTGAGATTATTCACAATGATCAAGGCAACAAAACTACTCCTTCTTTTGTTGCTTTTACTCAAGATCATCAAAGATTGATTGGTGATGCTGCTAAGAATCAAGCTGCCGCAAATCCACAAAACACTGTCTTTGATGCTAAGAGACTGATTGGTAGGAAGTTTAGTGATTCTATAGTACAGAAAGATATAATGTTATGGCCATTCAAGGTCATTGCGGGTGTGAATGACAAACCAATGATTTCTCTGAAGTTCAATGGACATGAGAAACACTTTTGCGCCGAGGTAATCTCTTCTATGGTACTCACAAAGATGCGGGAGTTTGCAGAGGCATATTTGGAATCACAAGTTAAAAATGCTGTCATTACTGTCCCAGCTTATTTCAATGATTCACAACGAAAAGCCACTATAGATGCTGGTGCCGTTGCTGGTCTTAATGTTTTGAAGATAATCAATGAACCAACAGCTGCAGCTATTGCATATGGTCTTGACAAGAGAACGAAATATGTGGGAGAACGAAATATTTTTGTCTTTGACCTAGGTGGTGGGACTTTTGATGTGTCTCTCCTTACTATTAAGAATGATGTATTCCAAGTGAAGGCCACCGGCGGAAACACTCACCTTGGAGGAGAAGACTTTGATAATAGAATGGTGAACTATTTTGTAGAGGAGATCAAAAGGAAGAAAAAGTTGGATATCATTGGAAATCCAAAAGCGTTGAGGAGGTTGAGAACTGCGTGTGAGAAGGCCAAACGAACACTTTCTTTTGCTAATGTAACCAATATTGAGGTAGATGCTTTATTTCAGGGTGTTGATTTTTCTTCGTCAATCACTCGTGCCAAATTTGATGAAATCAACATGGAACTTTTCGACATGTGCATGGAGATTGTTGAGAAGTGTCTTACCGATGCTAAGATGGACAAGAGTAACGTTGACGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCTAAAGTGCAGCAACTATTGCAGGACTTCTTCAATGGGAAGGAGTTATGCAGGAGTATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTGTTGAGTAAAAACATTAAGAATGTTCCAAACTTGGTGTTGATTGATGTCGCACCTCTGTCACTAGGTTGGAGCATTCTACGCGGTGTTATGGATGTGCTGATTCCTAGGAACACTTCCATTCCTGTCAAGAAGACAAAAAAATATACTACAGCTGAAGATAACCAATCGTGTGTCCCGATTAAAGTCTATGAGGGTGAGAGAACAAGAGCCAGAGATAACCATCTTCTGGGTTCCTTCGTACTTTCAGGATTACCTCCTGCTCCGCGCGGTCATCTTTATGATGTTTGCTTTGAAGTTGATCAAAATGGTATTTTAACAGTTTCTGCTATGGATAAATCCACCGGCAGTAATAACAAGATTACAATAACCAATGACATGGGAAGGTTGTCGGCCAAGGAAATTAAAAAATTGATTCAAGACGCGGAAACTTACCGTATTGCTGATAAGACATTCTTAAGAAAAGCGAAAGTAATGAATGCACTGGGCGACTGTGTTTATAAAATGAAAAATGTGTTGAAAAAGAATGATATTAATCTAAAGCTCTCTTCTGAAGAAAACAAGAAGATCAATGATGCAATTACAATGGCTACAAATTTGCTTGATGAGAATGGCCATCAGAATGGAATTGAAGTTCTTGAGGATCACTTGAATAAGCTTGAGAGTTTGTATGAGCGCACTATATCCAAATCCGGGTAG 1860 0.3984 MAKKDEGYAVGIDLGTTYSCVGVWQEQHGRVEIIHNDQGNKTTPSFVAFTQDHQRLIGDAAKNQAAANPQNTVFDAKRLIGRKFSDSIVQKDIMLWPFKVIAGVNDKPMISLKFNGHEKHFCAEVISSMVLTKMREFAEAYLESQVKNAVITVPAYFNDSQRKATIDAGAVAGLNVLKIINEPTAAAIAYGLDKRTKYVGERNIFVFDLGGGTFDVSLLTIKNDVFQVKATGGNTHLGGEDFDNRMVNYFVEEIKRKKKLDIIGNPKALRRLRTACEKAKRTLSFANVTNIEVDALFQGVDFSSSITRAKFDEINMELFDMCMEIVEKCLTDAKMDKSNVDDVVLVGGSSRIPKVQQLLQDFFNGKELCRSINPDEAVAYGAAVQAALLSKNIKNVPNLVLIDVAPLSLGWSILRGVMDVLIPRNTSIPVKKTKKYTTAEDNQSCVPIKVYEGERTRARDNHLLGSFVLSGLPPAPRGHLYDVCFEVDQNGILTVSAMDKSTGSNNKITITNDMGRLSAKEIKKLIQDAETYRIADKTFLRKAKVMNALGDCVYKMKNVLKKNDINLKLSSEENKKINDAITMATNLLDENGHQNGIEVLEDHLNKLESLYERTISKSG 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 478 494 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 398 417 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 212 222 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 372 392 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 149 169 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 61 69 - -
Vivi6g01363 619 PRINTS 70kDa heat shock protein signature 340 356 - -
Vivi6g01363 619 Gene3D - 74 129 - -
Vivi6g01363 619 Gene3D - 10 387 - -
Vivi6g01363 619 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Vivi6g01363 619 Gene3D - 195 369 - -
Vivi6g01363 619 SUPERFAMILY Actin-like ATPase domain 201 389 IPR043129 -
Vivi6g01363 619 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Vivi6g01363 619 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 545 IPR029047 -
Vivi6g01363 619 FunFam Heat shock 70 kDa 238 321 - -
Vivi6g01363 619 FunFam Heat shock cognate 70 kDa protein 2 322 369 - -
Vivi6g01363 619 FunFam Heat shock 70 kDa protein 392 546 - -
Vivi6g01363 619 Coils Coil 597 617 - -
Vivi6g01363 619 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi6g01363 619 SUPERFAMILY Actin-like ATPase domain 7 194 IPR043129 -
Vivi6g01363 619 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 518 609 IPR029048 -
Vivi6g01363 619 Pfam Hsp70 protein 9 614 IPR013126 GO:0005524|GO:0140662
Vivi6g01363 619 Gene3D - 546 619 IPR029048 -
Vivi6g01363 619 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 547 IPR029047 -
Vivi6g01363 619 FunFam heat shock 70 kDa protein-like 74 129 - -
Vivi6g01363 619 Gene3D Actin; Chain A, domain 4 238 321 - -
Vivi6g01363 619 PANTHER HEAT SHOCK PROTEIN 70KDA 9 581 IPR013126 GO:0005524|GO:0140662
Vivi6g01363 619 FunFam Heat shock protein 70 10 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01363 Vivi-Chr6 56741108 56743342 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01363 1 617 Calmodulin-binding Proteins AT3G12580 65.751 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01363 K03283 - vvo:131625172 1014.99