Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01358 ATGGCAAAAAAAGATGAAGGATATGCCGTTGGAATAGACCTTGGAACTACGTACTCTTGTGTTGCTGTGTGGCAAGAACAACATGGTAGAGTTGAGATTATTCACAATGATCAAGGCAACAAAACTACTCCTTCTTTTGTTGCTTTTACTCAAGATCATCAAAGATTGATTGGTGATGCTGCTAAGAATCAAGCTGCCACTAATCCACAAAACACTGTCTTTGATGCTAAGAGGCTCATTGGTAGGAAGTTTAGCGATTCTATAGTACAAAAAGATATGATGTTGTGGCCATTCAAGGTCATTGCGGGTGTGGATGACAAACCAATGATTTCCCTCGATTACAAGGGACATGAGAAGCACTTTAGTGCGGAGGAAATCTCGTCTATGGTACTTACAAAGATGCGGGAGATTGCAGAGGCATTTTTGGTATCTCCGGTTAAGAATGCTGTCATTACTGTCCCGGCTTATTTTAATGATTCGCAGCGAAAAGCCACTATAGATGCAGGTGCCATTGCTGGTCTTAATGTTTTGAAGATAATCAATGAACCAACCGCTGCAGCGATTGCATATGGCCTTGAAAAGAGAAGTAAATATGTTGGAGAGCGGAATATTTTTGTCTTTGACCTCGGTGGTGGGACTTTTGACGTGTCTCTTCTTACCATTAAGGATGATGTCTTCCAAGTGAAGGCCACGGCTGGAAACACTCACCTCGGGGGAGAAGACTTTGATAATAGAATGGTGAGTTACTTTGTAGAGGAGATCAAAAGGAAGAAAAAGTTGGACATTATTGGGAATCCAAAAGCCTTGCGGAGGTTGAGAACTGCGTGTGAGAAGGCCAAACGAACACTTTCTTTTGCTAACGTGACCAATGTTGAGGTAGATGCTTTATTTCAGGGTGTTGATTTTTCTTCGTCAATCACTCGTGCCAAGTTTGATGAAATCAATATGGATCTTTTTGAGGAGTGTATGGAGACTGTTGAGAAGTGTCTTACTGATGCTAAGATGGACAAGACTAACGTTGACGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCTAAAGTGCAGCGGGGCAGGAAGGAAGTATGCAAGGGCATCAACCCTGACGGGGCTGTTGCTTATGGTGCAGCGGTTCAGGCCGCTTTGTTGACTGGAAGCTTTAACAGTGTTCCAAACTTGGTTCTGATGGATGTGGCACCGCTGTCTCTAGGTTGTATGTTACTACATGATGTCATGTCTGTTGTAATTCCTAGGAACACTTCTATTCCTGTCAAGAAGACAAAACAATATTTTACTACTATAGACAATCAGTTGAAAGTTTCGATTGGGGTCTATGAGGGTGAGAGACCAAAAGCAATTGATAATCATCTTCTTGGTTCCTTTGTCCTTTCTGGTTTAACCCCTGCTCCTCGCGGCCATCCTTTGGATGTATGCTTTAATGTTGATCAAAATGGTATTTTAACCGTTTCTGCCATGGATAAATCTACTGGCAGCACAAATGCAATTACAATAACCAATAACAAGGCAAGATTGTCAACTGAAGAAATTAAAAGATTGATTCAAGAAGCTCAAGATTTCCATATTGAAGATAAGAAATTCTTAAGAAAGGCGGAAGTAATGAATGCACTGGACCACTGTGTTTACAAAATGAGAAATGCGTTGAAGAAGAAGGATATTAATCTAAACCTCTCTTCAGAAGAAAACAAGAAGATCAAGGATGCAATTACAATGGCTACAAATTTGCTTGATGAGAATGAGCAACAGAATGGAATTGATGTTCTCGAGGATCACCTGAATAAGCTTGAGAGTATGTATCAGCGCGTTATAGCCAAATACTGA 1839 0.4095 MAKKDEGYAVGIDLGTTYSCVAVWQEQHGRVEIIHNDQGNKTTPSFVAFTQDHQRLIGDAAKNQAATNPQNTVFDAKRLIGRKFSDSIVQKDMMLWPFKVIAGVDDKPMISLDYKGHEKHFSAEEISSMVLTKMREIAEAFLVSPVKNAVITVPAYFNDSQRKATIDAGAIAGLNVLKIINEPTAAAIAYGLEKRSKYVGERNIFVFDLGGGTFDVSLLTIKDDVFQVKATAGNTHLGGEDFDNRMVSYFVEEIKRKKKLDIIGNPKALRRLRTACEKAKRTLSFANVTNVEVDALFQGVDFSSSITRAKFDEINMDLFEECMETVEKCLTDAKMDKTNVDDVVLVGGSSRIPKVQRGRKEVCKGINPDGAVAYGAAVQAALLTGSFNSVPNLVLMDVAPLSLGCMLLHDVMSVVIPRNTSIPVKKTKQYFTTIDNQLKVSIGVYEGERPKAIDNHLLGSFVLSGLTPAPRGHPLDVCFNVDQNGILTVSAMDKSTGSTNAITITNNKARLSTEEIKRLIQEAQDFHIEDKKFLRKAEVMNALDHCVYKMRNALKKKDINLNLSSEENKKIKDAITMATNLLDENEQQNGIDVLEDHLNKLESMYQRVIAKY 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01358 612 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Vivi6g01358 612 FunFam Heat shock 70 kDa 238 321 - -
Vivi6g01358 612 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 538 612 IPR029048 -
Vivi6g01358 612 Gene3D Actin; Chain A, domain 4 238 321 - -
Vivi6g01358 612 Gene3D - 10 381 - -
Vivi6g01358 612 PANTHER HEAT SHOCK PROTEIN 70KDA 9 575 IPR013126 GO:0005524|GO:0140662
Vivi6g01358 612 SUPERFAMILY Actin-like ATPase domain 201 383 IPR043129 -
Vivi6g01358 612 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Vivi6g01358 612 FunFam Heat shock 70 kDa protein 74 129 - -
Vivi6g01358 612 Gene3D - 195 363 - -
Vivi6g01358 612 Gene3D - 74 129 - -
Vivi6g01358 612 FunFam Heat shock protein 70 10 202 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 212 222 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 392 411 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 366 386 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 61 69 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 149 169 - -
Vivi6g01358 612 PRINTS 70kDa heat shock protein signature 472 488 - -
Vivi6g01358 612 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi6g01358 612 Gene3D - 541 612 IPR029048 -
Vivi6g01358 612 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 388 540 IPR029047 -
Vivi6g01358 612 Pfam Hsp70 protein 9 611 IPR013126 GO:0005524|GO:0140662
Vivi6g01358 612 SUPERFAMILY Actin-like ATPase domain 7 194 IPR043129 -
Vivi6g01358 612 FunFam Heat shock 70 kDa protein 386 540 - -
Vivi6g01358 612 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 389 544 IPR029047 -
Vivi6g01358 612 Coils Coil 591 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01358 Vivi-Chr6 56699802 56701850 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01358 1 611 Calmodulin-binding Proteins AT3G12580 64.136 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01358 K03283 - vvo:131625172 1055.43