Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01251 ATGACTTCTAGAGGGGAGTTGGCTTACCAGCAGCTTTGCAGTGGAATGATTGAAGAGTTTAATGATTGCTCAAAACAAGTCCTCGAAATGGAGTCACTGATTCAGAGTCCTGACTATAGCCTTGATGATCTAGCACAAATCTTTAGAGCTGTTCAAGATCAGGAAAGGCATAAAGATTCAATCTCGGGAGGTCAAAAGCAAAGAGTTGCAATCACAAGAGCAATTTTGAAACATCCAAGAATCTTACTTCTTGATGAAGCTACAAGTGCCTTTGATGTCGAATATGACATAATTGTACAAGAGGGAATTTGTGAAGACATGATACATCCTGACCATGTTGTAGTCATTAAGTTCACTATGTCTGGGCATACTCAGTTGCGCAGCAATGCAATCATGATCACCAGCACCATCACGGCCATCCTTTTCAGCACAATGGTAATGAGATTCATGTTGAGCTCATCCAAACATTATTGA 474 0.4051 MTSRGELAYQQLCSGMIEEFNDCSKQVLEMESLIQSPDYSLDDLAQIFRAVQDQERHKDSISGGQKQRVAITRAILKHPRILLLDEATSAFDVEYDIIVQEGICEDMIHPDHVVVIKFTMSGHTQLRSNAIMITSTITAILFSTMVMRFMLSSSKHY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01251 157 Pfam ABC transporter 44 89 IPR003439 GO:0005524
Vivi6g01251 157 Gene3D - 61 103 IPR027417 -
Vivi6g01251 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 109 IPR027417 -
Vivi6g01251 157 PANTHER ABC TRANSPORTER B FAMILY 60 115 IPR039421 -
Vivi6g01251 157 Pfam DNA repair REX1-B 3 58 IPR039491 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01251 Vivi-Chr6 47967553 47969581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01251 61 108 Calmodulin-binding Proteins AT2G36910 64.583 5.68e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01251 - - vvo:131611492 309.301