Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01188 ATGTATACTTATTCTGCAGCCGTTCCTCGCTGGCTTCAATTCCTCCTCACCGAGAAATTCTACAACGCTTGTTTAATTCATCCAGAAGCAAAAAAGAATGAAAAGAACGTGTATTGTTTGGATTGTTGCATCAGTCTTTGCCCTCACTGTGTTTCTCCCCACGCCTCTCACAGGCTCTTACAGATCAGAAGATACGTGTATCACGACGTTATAAGAGTGGATGATGCTGCAAAACTAATCGACTGTTCTTACATTCAGTCCTACAAAACAAACAGTGCGAAAGTAGTGTTTTTGAATCAGAGGCCACAAACAAAGAAATGCTCCTCCGGCAATATCTGCAGCACCTGTGACAGAAGCCTGCAAGAACCATACCATTTCTGTTCTCTCTCTTGCAAGGTGAGTCACCTTGTGAAAACATTGGGTACTCTATCTGGTTACCTTTTCGAGTGCAACTACATGCCATTATCTGATTCTGGGCTTGACGACGGTTTAATGACTCCTGACTCGGTTCTTGAACCGGTTGGTTCGAACCGGACTTCATCTGGTTCGGGTGGATATGGTGGAGTGGATTGTAGAACCACACTTGCTTGCACTGCAACTACTGAGATTGTGAGAAAGAAGAGAAGTGGCTGTTCAACTTTCCGACCACCGTGTAGGCCTGCTTGCTCGCCGGTAACGGAAATCACAGTGAATAGTATGAACAGAAGGAAAGGAAATCCGCAGAGGGCCCCACTATATTGA 741 0.4521 MYTYSAAVPRWLQFLLTEKFYNACLIHPEAKKNEKNVYCLDCCISLCPHCVSPHASHRLLQIRRYVYHDVIRVDDAAKLIDCSYIQSYKTNSAKVVFLNQRPQTKKCSSGNICSTCDRSLQEPYHFCSLSCKVSHLVKTLGTLSGYLFECNYMPLSDSGLDDGLMTPDSVLEPVGSNRTSSGSGGYGGVDCRTTLACTATTEIVRKKRSGCSTFRPPCRPACSPVTEITVNSMNRRKGNPQRAPLY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01188 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 245 - -
Vivi6g01188 246 Pfam PLATZ transcription factor 63 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01188 Vivi-Chr6 40894430 40896290 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi6g01188 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01188 - - pvu:PHAVU_008G142900g 436.417