Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01187 ATGCCAAAACGAGAAACGAGCGGAGAAGGTAAGGAAGCGGAGAGCGAGAAACAAACGGAGAAGACGAGCGGAGAAGGTAAGGAAGCGGAGAGCGAGAAACAAGCGGAGAAGACGATCGGAGAACACCATTTTAGAGGTCAAACGTGGTCACAACAAAGATTACTTTCATGCATTTGCTACTGTTTCTACACTATCACTCAACCATTTTCTGTACTACAATTTACAGTTTCAGATACGCGCACCATGTCTAGGGCTCCCATTCTCATTAAGGAGCTGGTCCAAGGGAACCAGGTGTGGAAAATGCACATCAGGGTCGTTGACCTGTGGGTTGTTACAGAAAAAACAGGGTATCAACACCTAGAGTGTGTTCTACAAGATGGAACGGGTGACCAAATCCATGTGACCACTAGCCGTTGGGATTTTAAAGATTGGATAGAGCAGATCAAAGAGCACGAAACTTATTATCTGTATAATGGGGAGCCTGTGGCTAATGATGGCCCTTTGAAAGTATGTTCGAACCCTCTCAAGATTCTTTTTAATGGAGGCACTACTCTCACCAAGGTGGACATGCCGGACATCCCACCATACAAATTCAACTTCCATTCCATTGAAAACTTTCTCAATGGACATTTCAAGCCTGATATGCTCTATGATGTTATTGGTGTCTTGCAAGATGTTGTTAAGACACAAATGGGGGGTGGGGGTAAGAAGTCCTGTACCAATATCACATTACGTGACGTTGTGGGAAATGCCATTGAAGTTGCTTTATGGGGTGATTTTAGCAAACAATTCATGGACTACAAGACTCTTGGCAAACATGTTGGTCCCACAATTATCATTTTGACTCATGCTTGGTGTAAGCCCAATACAGGTCTTTTTGGAGCAGCTGATTTGTCAAATGCATCCAACCTTTCTCTATCACTAACTTGTGATTCATCCATTCAATCCACAAACCAGAATTGGACTAGTCGTAATGAGGTCAGGACTATCCGTGACATTTATGAAGGAGAAAAGGATTGTTTTGCAACTACTATTGGAACTACCAAACGATTCAAGGCTTCAAGGTTTGGATGGTTTTTTGAGAGCTGCCCAGGATGTAAGATTTCTATCAAGTCCGTTGGAGGGAAAGTTGAGTGCCACTGTGGAGTTAAAGATGTTGAACCAATTACTAAATTCAAAATAGAAGTTGAAGTTGAATATGATGGCTTTAATGGAACCTTTGTCTTTTGGGATAAGGATTGTGTCCCATATACTAAACTGTCTGCTAAAGAGTTAAGAAAGCTCATGATAGCGAATGGAGAAGACAACCCAAAAATATGGCCGGCTCAAGTTGACAATTTGTTGAATAAGGAAATGGCGTTCCGTATCAAATTTCAATCATCTTACAAACAGTATTCAATTGTGACAATTCTTAATGAGGATAATGTTTACAACAAACTTAAGGGATACCTAACCCCGAATGAGGAGCATACATCAAATGCTCTTGTTTTGGAGATCTCCAATTCTGATCCAAATCATGAGCCAACTGAACCTATTATGACACTATCTGCTCAAGCTTCGATATCTCCTCAACCTTCGTCTGCAAGCTCCGGCAGCACACCTGCCAAGAGGGGAGCTATTTCAACATCAGTTAATGAGTTGATTGATGCTGAAGATCTGACTCCTAAACAATCTGCTACTAAGGCTAAGACTGCAAGAAAGATCAAGCATATCAAGAAGGAGTAA 1725 0.4162 MPKRETSGEGKEAESEKQTEKTSGEGKEAESEKQAEKTIGEHHFRGQTWSQQRLLSCICYCFYTITQPFSVLQFTVSDTRTMSRAPILIKELVQGNQVWKMHIRVVDLWVVTEKTGYQHLECVLQDGTGDQIHVTTSRWDFKDWIEQIKEHETYYLYNGEPVANDGPLKVCSNPLKILFNGGTTLTKVDMPDIPPYKFNFHSIENFLNGHFKPDMLYDVIGVLQDVVKTQMGGGGKKSCTNITLRDVVGNAIEVALWGDFSKQFMDYKTLGKHVGPTIIILTHAWCKPNTGLFGAADLSNASNLSLSLTCDSSIQSTNQNWTSRNEVRTIRDIYEGEKDCFATTIGTTKRFKASRFGWFFESCPGCKISIKSVGGKVECHCGVKDVEPITKFKIEVEVEYDGFNGTFVFWDKDCVPYTKLSAKELRKLMIANGEDNPKIWPAQVDNLLNKEMAFRIKFQSSYKQYSIVTILNEDNVYNKLKGYLTPNEEHTSNALVLEISNSDPNHEPTEPIMTLSAQASISPQPSSASSGSTPAKRGAISTSVNELIDAEDLTPKQSATKAKTARKIKHIKKE 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01187 574 SUPERFAMILY Nucleic acid-binding proteins 198 308 IPR012340 -
Vivi6g01187 574 MobiDBLite consensus disorder prediction 1 36 - -
Vivi6g01187 574 MobiDBLite consensus disorder prediction 519 574 - -
Vivi6g01187 574 CDD RPA1_DBD_A_like 100 184 - -
Vivi6g01187 574 SUPERFAMILY Nucleic acid-binding proteins 88 188 IPR012340 -
Vivi6g01187 574 Gene3D - 309 483 IPR012340 -
Vivi6g01187 574 SUPERFAMILY Nucleic acid-binding proteins 326 472 IPR012340 -
Vivi6g01187 574 Gene3D - 87 189 IPR012340 -
Vivi6g01187 574 MobiDBLite consensus disorder prediction 519 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01187 Vivi-Chr6 40859519 40868923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01187 99 261 Core DNA Replication Machinery Family AT5G08020 24.277 9.80e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01187 - - vvo:131613573 1149.42