Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01144 ATGGAACCGGTACAGAAGATTTCAGGAGGAGGAGCAGAAACACTTAAAAATATGCCTCCTGGATCGTCGATTTCTATTGCATATCACCCCAATTTTGGACCTCATGATGATCTCATTGTTCTAGAGCTCGACGAGAAACTGATCCCAGATGTTTTGAATGAAAGGATGGTCTTAAGAGGACAGCCTGATGAGGATGCGGTTCTTTGTACTCAATCAAAAACATATGCTATGAAATTTGTTGGAACTTCCAACTCTGTTTTGCTTGTACCACCAGAAAATCAATCAGAATCGTATGAAAATCAGCAGAAGAATGACATTAACAATACTGACGAGAAAGCGGTTGCACGTATAATAAAAGTTGTACCTGGTAGTTTGGAGCTTATTGAGGTTTCCCCCAAACTTGATAAACTCAAATTGCTTCTTTCAGAAAACACTTACAGATTTGACGAAAATGACATGGAAATTTTAGAAGAGAATCAGGAGTCAAGAGCGGGATTATATAACTGGAATGATCTTATAGACAATATTCAAGCTAGTGACGGGGAATTAAGATTTGGATTGCAGGCTCTTTCTGCTGTGGAGATTAATGGGTATTGGAGATTAGTTGATGAGAGCTACATGGACATGATTCTGGGAGTGCTTTTGAAAAATTCAGTGTTGAATGACTGGTCACTCAATGCTCTAAATGAAGATGAAGTTGTGAATATGCTGGAATCAGACGGATTTCCAATGGTTCTTGCAAGGCATTGCTTGCATGTATATGCCAAGCAAGTAAATGAAAATGATTGCATGGAAAGCTGTGTGTGGAAGTTGGATGAGAAGCGGGTATGCATACACTTTGCAAGAGAAATCCTGAAAGGAGGTAAGAGGAAGTTAGAGAGTTTTATGGAAGAATGGAGGAAGAAGACTCCAGACGAAATGCAGCCATCTTTTGATCTTATGGAAGGAGAGGTATTGACAGAGAAACTTGGAGTTGAGACTTGGGTTCGTGCGTTCCGCGTCTCTTCTTTGCCTTCCACTCCAGCTGAACGATTCTCCATTCTTTTCAGAGAGCGTGCAAAATGGGACTGGAAAGATCTGCAGCCTTATATCAGGGATCTGAATGTACCAGGTCTTTCTGCAGAAGGTTTATTACTCAAATACACTCGAAAGACACAACCATCACCTAATCAAGATCCAGTTTTCAGTGCAAGATAG 1197 0.4052 MEPVQKISGGGAETLKNMPPGSSISIAYHPNFGPHDDLIVLELDEKLIPDVLNERMVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPENQSESYENQQKNDINNTDEKAVARIIKVVPGSLELIEVSPKLDKLKLLLSENTYRFDENDMEILEENQESRAGLYNWNDLIDNIQASDGELRFGLQALSAVEINGYWRLVDESYMDMILGVLLKNSVLNDWSLNALNEDEVVNMLESDGFPMVLARHCLHVYAKQVNENDCMESCVWKLDEKRVCIHFAREILKGGKRKLESFMEEWRKKTPDEMQPSFDLMEGEVLTEKLGVETWVRAFRVSSLPSTPAERFSILFRERAKWDWKDLQPYIRDLNVPGLSAEGLLLKYTRKTQPSPNQDPVFSAR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01144 398 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 9 398 IPR019128 GO:0007064|GO:0031390
Vivi6g01144 398 Pfam Sister chromatid cohesion protein Dcc1 40 364 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01144 10 398 C3H Transcription Factor Family AT2G44580 54.937 5.50e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01144 K11271 - gmx:100817511 627.476