Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01026 ATGGTTGAGATTTTGGCCATGATTTTAAGTTTAATCTCAATCTTAGCTTTTACTTATGTTGTGAAATATCTTAACAAACAAGGTTCATCACACAACCTGCCCAATGGAAGTATGGGGTGGCCATTTATCGGAGAGACTCTTCTATTCCTCAAGCCTCATAAATCAAATTCCTTAGGAAGCTTTTTACAAGACCGTTGCTCTAGGTATGGAAAAATTTTCAAGTCACATATATTTGGCTCTCCCACGATAATTTCATGTGACTATGAGTTCAACACGTTTATTCTTCAAAATGAGGGGAAATTATTCCCTGTTGATTACCCTAAAGTAATGCACAAAATTTTAGGAAAATATGCTCTAATTCTTGTCACAGGAGAAGTTCACAAAAAGCTAAGAAGCACGGTTATCAGTTTTGTTAGTGCATCAAAGTCCGAATCCAACTTCCTTCACTTTGTTGAAATGCTTGCCCTCTCAAGGATTAACTCATGGGGATCAAATTGTAAACAAGTTGCTTTCTATGCAGAGGCTAAAAAGTTTGCCATCAATGTTATGCTGAAACACCTTCTAAATATGAACCATGATGATCCCCTTGCCTCCAAGATTTTGGACAACTTTGAGAAATATATTAAGGGCTTCATTTCACTTCCCTTAAATTTTCCAGGGACTATATACTCCAAAGCTGTGAAGGCTAGATTAAGACTATCATCTATCATCAAAGATATCATAGTGAAGAGGCGTAAAGCGAATAATAGTATGGAAGAAGTGGACCTATTGAATTTGATTTTATCGAAGGAGAATTTAAGTGATGAAGAGATGGTGAGCATTGTTTTGGATCTTTTGTTTGGAGGATATGAGACAACCTCAAAACTTCTCTCTTTGATTGTTTACTTCCTTAATGGAGCCCCAGATGCTTTAAAATGCTTAAAGGAAGAGCATGAAATGATAAGGAAAAGTAAAACGGAAGGGGATCTACTGAATTGGGAAGACTATAAGAAAATGGAGTTCACTCAAAATGTGATTAATGAAGCTATGAGGTGTGGGAATGTTGTGAAATATCTGCATAGAAAAGCTTCTAAAGATATCAAATTCAAAGAGTTTGTGATACCATCAGGGTGGAAGGTGTTTCCTGTTTTGTTAGCACCACATTTGGATTCTAATAACTTCGAAAATCCATTGGAATTCAATCCCTTTCGATGGAATGTATGTTGCATTGGACAAGACAAGAAAGTTGCACCATTTGGTGGTGGCCCACGACTTTGTCCAGGGGCTGATCTAGCTAAAGTCGAAATATCATTCTTCCTTCATCATCTTATCCTTAACTACAGGTGGAAAATGAAGGCAAACGACGACCCAATTGCTTTCCCTTATGTGGAATTCATAGGAGGGTTACTATTGGATCTTCAACCCACAACCACTACTTTTGGGAAACAACACGCTTGA 1437 0.3737 MVEILAMILSLISILAFTYVVKYLNKQGSSHNLPNGSMGWPFIGETLLFLKPHKSNSLGSFLQDRCSRYGKIFKSHIFGSPTIISCDYEFNTFILQNEGKLFPVDYPKVMHKILGKYALILVTGEVHKKLRSTVISFVSASKSESNFLHFVEMLALSRINSWGSNCKQVAFYAEAKKFAINVMLKHLLNMNHDDPLASKILDNFEKYIKGFISLPLNFPGTIYSKAVKARLRLSSIIKDIIVKRRKANNSMEEVDLLNLILSKENLSDEEMVSIVLDLLFGGYETTSKLLSLIVYFLNGAPDALKCLKEEHEMIRKSKTEGDLLNWEDYKKMEFTQNVINEAMRCGNVVKYLHRKASKDIKFKEFVIPSGWKVFPVLLAPHLDSNNFENPLEFNPFRWNVCCIGQDKKVAPFGGGPRLCPGADLAKVEISFFLHHLILNYRWKMKANDDPIAFPYVEFIGGLLLDLQPTTTTFGKQHA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01026 478 PANTHER CYTOCHROME P450 26 31 444 - -
Vivi6g01026 478 Pfam Cytochrome P450 34 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 CDD CYP90-like 65 468 - -
Vivi6g01026 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Vivi6g01026 478 FunFam Cytochrome P450 724B1 28 467 - -
Vivi6g01026 478 SUPERFAMILY Cytochrome P450 30 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 Gene3D Cytochrome P450 24 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01026 478 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01026 Vivi-Chr6 32700835 32704318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01026 38 362 Cytochrome P450 AT5G14400 55.927 3.62e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01026 K12639 - gmx:100791737 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01026 6 32700835 32704318 Vivi6g01026 6 32700835 32704318 ECH