Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01019 ATGGAAGTTATGGACGATGTTTGGGGATCAACCACCGTCGGGCTGAATAACCAGGTGAGGGTTACTCGACTTAGAGGGCTGGTTGCCTTTTACCACCTTTTCATCTGTTCGGTGTTAATTTCTCTTTTTCTTTTTGTTTCTCAATCAACCACACATGCATACCGAGCCTTTGCGCAACTGCTCCACTCTCACGGTCTTGATATCATTTTCCATCCCATCCCACCTATCTTGGATCTCTCTCTAAGATGTGCCGTCAGTCCAACTCTGGTAAAGTCATCAAACACCAGCTTGGAGACTAAAAGCTCTGGATACTGTATACAGCCTGCTTGCATTGAACCAACCTGTGTAATTCAGCCAGATTGCATCAAACCGTCATGCTTCACGCCGCGTTTTCTATCAGGCAAATCCAAAAAGAAAGAAAAGAAGTTGAAACCTAAGAATGACGTGCACAATCAGGTGACACCACTCCCCGAGCTTATGGCCGAGCCCACAAATGCCCGATCAATGTCCTTCGTTGGCACACACGAGTACTTGGCGCCCGAAATCATCAAAGGCGAAGGTCACGGCAGTGCTGTAGACTGGTGGACATTTGGTATATTCTTATACGAGCTTTTGTTCGGTAGAACACCATTCAAAGGTTCAGCAAATCGAGCGACTTTATTTAACGTAGTTGGGCAGCCCTTAAGATTTCCTGAATCCCCTAGTGTTAGCTTTGCTGCTAGGGACTTGATTAGGGGTCTACTTGTGAAAGAGCCTCAGCATCGTCTTGCGTATAGACGTGGAGCTACAGAGATAAAACAACATCCATTCTTTCAAAATATTAACTGGGCGCTGATCCGTTGCGCAACTCCTCCAGAAGTGCCGAGACAGGCCATGAAAGAAGCACTTATAGCTGAGAAGAAGGCGGCGCCTGGTGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 957 0.4608 MEVMDDVWGSTTVGLNNQVRVTRLRGLVAFYHLFICSVLISLFLFVSQSTTHAYRAFAQLLHSHGLDIIFHPIPPILDLSLRCAVSPTLVKSSNTSLETKSSGYCIQPACIEPTCVIQPDCIKPSCFTPRFLSGKSKKKEKKLKPKNDVHNQVTPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQAMKEALIAEKKAAPGVKPSGNYLDIDFF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01019 318 Pfam Protein kinase domain 168 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01019 318 SUPERFAMILY Protein kinase-like (PK-like) 166 294 IPR011009 -
Vivi6g01019 318 ProSiteProfiles Protein kinase domain profile. 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01019 318 SMART serkin_6 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01019 318 Gene3D Transferase(Phosphotransferase) domain 1 165 289 - -
Vivi6g01019 318 PANTHER FLIPPASE KINASE 1-RELATED 78 294 - -
Vivi6g01019 318 FunFam serine/threonine-protein kinase D6PK-like 166 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01019 Vivi-Chr6 32310423 32312163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01019 77 318 AGC Kinase Gene Family AT3G27580 69.884 5.91e-126 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi6g01019 Pkinase 2.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01019 K08286 - gmx:100802402 441.81