Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00982 ATGGAAGAAGACAACAACTCTAATCCGATCGATCCAAAAACCGGGTTCAACTCCATATCCAAAACCTTCCACAGTCTACGGCCCCCACTCAACCTTCCTCCACCATACGCCTCCATCTCCGCCGCAACCTACATTCTCTCCCTCCGCCACAAATCACCTTCCTCCGACTCCCTCACTTTCCTCATCGACTCAACCACATCTCACCAAATCTCTCACTCCATCTTCATCCAACGCTCACAAACCCTCGCCACCAACCTCACCACCCTCCACGGACTCACCAAAAACCACACCGCATTGGTACTTTCCCCAAACATCATCCAGGTGCCAATCCTCTACTTCGCACTACTCTCCATTGGCGTGGTCCTTTCACCCGTTAACCCAGCTTCCTCTCCCTCCGAGATTTCTCACCTCATTAGCCTCTCGAAACCGATCATCGCTTTCACGACGTCGTTTTTGTTTCACAAACTTCCAAAACTCTCACTCGGAACGATTCTCATTGACTCGCCCGAGTTCGACGCACTCACCACTGAAGATAATAGTTCACCGGTATCGGTATCGATACCGATACCGCCGGTTGTTAATCAATCGGACGTGGCTGCGATTCTGTACTCCTCGGGGACCACGGGGAAATCGAAAGGCGTAATGCTGACTCACCGGAACATTATGGCGTCGGTGGCGTCGTACAATGCCGTTAGGATTCCGACGGAGAGTCCTGCCGTGTGTTTGGCTGTGGTGCCTTATTTTCACGTGTATGGTTTTACCTACCTTTTCAAGTCGGTGGCTATGATGGAAACGTTGGTTGTGATGGAGAGGTTTGGATTGGAGAAAATGCTGGGTGCTTTCCAGAGGTTTCGAGTCACTAATCTTGCGGCGGCGCCGCCAGTAGTGGTGGCGATGAATAAAGAGAGAGCGACGGAGGGGTATGATTTGTCGTCATTGAAATGGCTGGCTTGTGGTGGTGCTCCGTTGGGAAAGGACAACTTGGATGCTTTCAAAGCAAAGTTCCCTCAAGTATCCATTCTCCAGGGATATGGGTTAACTGAATCAACCGCAGGTGTTATCCGAATAGTAGGTTCAGATGAGGCTAGACGAGCAGGTACTACAGGTAGGCTGGGATCAGGGATGGAAGCTAAAATAGTGAACCCCAACACAGGAGAGTCCATGTCTCCTGGTGAAGAAGGAGAACTTTGGGTTAGAGGACCTCAAATAATGAAAGGTTATGTTGATGACCCAGTGGCAACTGCTGTTACTTTTGTGGATGGATGGTTGAGAACTGGCGATATTTGCTATTTTGACAACGAAGGTTTCGTCTATGTTGTAGACAGGTTGAAAGAATTGATCAAATATAAAGGTTACCAGATACCCTGA 1368 0.4927 MEEDNNSNPIDPKTGFNSISKTFHSLRPPLNLPPPYASISAATYILSLRHKSPSSDSLTFLIDSTTSHQISHSIFIQRSQTLATNLTTLHGLTKNHTALVLSPNIIQVPILYFALLSIGVVLSPVNPASSPSEISHLISLSKPIIAFTTSFLFHKLPKLSLGTILIDSPEFDALTTEDNSSPVSVSIPIPPVVNQSDVAAILYSSGTTGKSKGVMLTHRNIMASVASYNAVRIPTESPAVCLAVVPYFHVYGFTYLFKSVAMMETLVVMERFGLEKMLGAFQRFRVTNLAAAPPVVVAMNKERATEGYDLSSLKWLACGGAPLGKDNLDAFKAKFPQVSILQGYGLTESTAGVIRIVGSDEARRAGTTGRLGSGMEAKIVNPNTGESMSPGEEGELWVRGPQIMKGYVDDPVATAVTFVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQIP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00982 455 Gene3D - 32 445 IPR042099 -
Vivi6g00982 455 Pfam AMP-binding enzyme 59 449 IPR000873 -
Vivi6g00982 455 SUPERFAMILY Acetyl-CoA synthetase-like 58 454 - -
Vivi6g00982 455 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Vivi6g00982 455 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00982 Vivi-Chr6 30239958 30244205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00982 1 455 Monolignol Biosynthesis Gene Families AT5G63380 47.436 4.87e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00982 K01904 - gmx:100801143 530.02