Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00981 ATGGAAGAAGACAACAACTCTAATCCGATCGATCCAAAAACCGGGTTCAACTCCATATCCAAAACCTTCCACAGTCTACGGCCCCCACTCAACCTTCCTCCACCATACGCCTCCATCTCCGCCGCAACCTACATTCTCTCCCTCCGCCACAAATCACCTTCCTCCGACTCCCTCACTTTCCTCATCGACTCAACCACATCTCACCAAATCTCTCACTCCATCTTCATCCAACGCTCACAAACCCTCGCCACCAACCTCACCACCCTCCACGGACTCACCAAAAACCACACCGCATTGGTACTTTCCCCAAACATCATCCAGGTGCCAATCCTCTACTTCGCACTACTCTCCATTGGCGTGGTCCTTTCACCCGTTAACCCAGCTTCCTCTCCCTCCGAGATTTCTCACCTCATTAGCCTCTCGAAACCGATCATCGCTTTCACGACGTCGTTTTTGTTTCACAAACTTCCAAAACTCTCACTCGGAACGATTCTCATTGACTCGCCCGAGTTCGACGCACTCACCACTGAAGATAATAGTTCACCGGTATCGGTATCGATACCGATACCGCCGGTTGTTAATCAATCGGACGTGGCTGCGATTCTGTACTCCTCGGGGACCACGGGGAAATCGAAAGGCGTAATGCTGACTCACCGGAACATTATGGCGTCGGTGGCGTCGTACAATGCCGTTAGGATTCCGACGGAGAGTCCTGCCGTGTGTTTGGCTGTGGTGCCTTATTTTCACGTGTATGGTTTTACCTACCTTTTCAAGTCGGTGGCTATGATGGAAACGTTGGTTGTGATGGAGAGGTTTGGATTGGAGAAAATGCTGGGTGCTTTCCAGAGGTTTCGAGTCACTAATCTTGCGGCGGCGCCGCCAGTAGTGGTGGCGATGAATAAAGAGAGAGCGACGGAGGGGTATGATTTGTCGTCATTGAAATGGCTGGCTTGTGGTGGTGCTCCGTTGGGAAAGGACAACTTGGATGCTTTCAAAGCAAAGTTCCCTCAAGTATCCATTCTCCAGGGATATGGGTTAACTGAATCAACCGCAGGTGTTATCCGAATAGTAGGTTCAGATGAGGCTAGACGAGCAGGTACTACAGGTAGGCTGGGATCAGGGATGGAAGCTAAAATAGTGAACCCCAACACAGGAGAGTCCATGTCTCCTGGTGAAGAAGGAGAACTTTGGGTTAGAGGACCTCAAATAATGAAAGGTTATGTTGATGACCCAGTGGCAACTGCTGTTACTTTTGTGGATGGATGGTTGAGAACTGGCGATATTTGCTATTTTGACAACGAAGGTTTCGTCTATGTTGTAGACAGGTTGAAAGAATTGATCAAATATAAAGGTTACCAGGTGGCTCCTGCGGAGCTGGAACAATTACTCCAGTCTCACCAAGAGATAAAAGATGCTGCAGTTGTTCCATACCCTGATGAAGATGCTGGCCAGGTTCCCCTGGCGATTGTGGTAAGGCAACCTCAAAGCTGCATGGGTGAAGCAGAAATAATAGATTTTGTAGCCAAACAGGTTGCACCATACAAGAAGATAAGGCGTGTGGTATTTGTCCATTCCATACCTAAGAATGCATCAGGAAAGATACTGAGGAAGGAATTGTTGAATAAAATTCTCGCTCAACGAACATTTCCTAGGTTATAA 1659 0.4834 MEEDNNSNPIDPKTGFNSISKTFHSLRPPLNLPPPYASISAATYILSLRHKSPSSDSLTFLIDSTTSHQISHSIFIQRSQTLATNLTTLHGLTKNHTALVLSPNIIQVPILYFALLSIGVVLSPVNPASSPSEISHLISLSKPIIAFTTSFLFHKLPKLSLGTILIDSPEFDALTTEDNSSPVSVSIPIPPVVNQSDVAAILYSSGTTGKSKGVMLTHRNIMASVASYNAVRIPTESPAVCLAVVPYFHVYGFTYLFKSVAMMETLVVMERFGLEKMLGAFQRFRVTNLAAAPPVVVAMNKERATEGYDLSSLKWLACGGAPLGKDNLDAFKAKFPQVSILQGYGLTESTAGVIRIVGSDEARRAGTTGRLGSGMEAKIVNPNTGESMSPGEEGELWVRGPQIMKGYVDDPVATAVTFVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVAPAELEQLLQSHQEIKDAAVVPYPDEDAGQVPLAIVVRQPQSCMGEAEIIDFVAKQVAPYKKIRRVVFVHSIPKNASGKILRKELLNKILAQRTFPRL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00981 552 CDD 4CL 38 539 - -
Vivi6g00981 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 541 - -
Vivi6g00981 552 SUPERFAMILY Acetyl-CoA synthetase-like 58 545 - -
Vivi6g00981 552 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Vivi6g00981 552 Gene3D - 445 546 IPR045851 -
Vivi6g00981 552 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Vivi6g00981 552 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Vivi6g00981 552 Gene3D - 32 444 IPR042099 -
Vivi6g00981 552 Pfam AMP-binding enzyme 59 449 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00981 Vivi-Chr6 30239958 30245064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00981 1 539 Monolignol Biosynthesis Gene Families AT5G63380 50.181 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00981 K01904 - gmx:100801143 665.225