Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00950 ATGGAAAAACAGCATCCCATGAGCCACGAGAAAGCAACCGAGTTTCGACCATTCTCGGTGGTAACACCTCATATGCGTACATTTCACCTATCATGGTTCAACCTCTTCTCCTGTTTCTTCACCACCTTCTCCATCCCTCCTCTCCTCCCAGTCATCCGCCACGACCTCAACCTCACAGCCGGTGACATAGGCAGAGCAGGTTCCGCTTCTTTCGCCGGCTCCATCCTCTCCCGCCTACTGATGGGCCCAATCTGCGACCTCGTGGGTCCCCGTAGAGCCTCGGGTATTCTTTCTCTCATAACCGCTCCCATCATCCTCCTCACCTCCATTGCCTCTACTCCTGGCGAATTCATCCTAGTTCGTTTCCTCGTAGGCTTCTCCCTCGCCAATTTCGTCGCAAATCAGTTCTGGATGAGCTCTATGTTTGACGAATCCGTTGTTGGGTCAGCCAACGCTTTCTCCGCTGGCTGGGCAAACACCGGTTCCGGCGTCACTCAACTTGTGATGCCTTTAATTTACTCCTCTCTCGTCACGTATCTTCCATCCTCCACCGCTTGGCGGGTATCATTTATAGTTCCCGCCGTTTTCCAAACGGTTACAGGTGTGTTAGTTTTAGCATTCGGCCATGAGGCAAACAAAATTCCATCAGAACCAAAGGAGAATACATTGAAAGTGATATTTGGTGGGTTAAGGGATTACAGAGGATGGATACTGGGGTTACTATATGGATTCTCGTTTGGGGTTGAAATGACAACGGATAACATAATAGCGCAATATTTTTATGACAGATTTGGGGTGAACCTAGAAACAGCAGGAATTATTGCAGCATGTTTTGGAATCACGAATTTGTTTTCAAGACCAATGGGAGGGATGGTTTCAGACAAAATGGGGAAGAGGTTTGGTATGAGAGGGAGATTGTGGGGTTTGTGGATTGTTCAAACGGTTGCGGGTTTGCTTTGTGTGATGCTTGGACGACTTGACTCCTTGTGGAGTTCTATTGTTATCATGTGTTGTTTCTCTGTTTTTGTTCAAGCTGCTTCTGGCCTCACGTTTGGTGTGGTTCCCTTTGTTTCTAAAAGTTCACTAGGGGTAATATCGGGAATGACAGGGAGTGGTGGAACAATAGGAGCCGTTGTAACTCAAATGCTGCTATTCTCAGGCGACAACTTATCAAAGCAAACAAGCATATCACTAATGGGCTTAATGATGATATTATGTACTCTTCCTGTTACCTTAATCTACTTCCCTCAATGGGGTGGCATCTTTTATGCTCCTTCTCCACATTATGATTATGGTTATGATCAAGAAAACTATACCTTGTTGGAGTAA 1329 0.4635 MEKQHPMSHEKATEFRPFSVVTPHMRTFHLSWFNLFSCFFTTFSIPPLLPVIRHDLNLTAGDIGRAGSASFAGSILSRLLMGPICDLVGPRRASGILSLITAPIILLTSIASTPGEFILVRFLVGFSLANFVANQFWMSSMFDESVVGSANAFSAGWANTGSGVTQLVMPLIYSSLVTYLPSSTAWRVSFIVPAVFQTVTGVLVLAFGHEANKIPSEPKENTLKVIFGGLRDYRGWILGLLYGFSFGVEMTTDNIIAQYFYDRFGVNLETAGIIAACFGITNLFSRPMGGMVSDKMGKRFGMRGRLWGLWIVQTVAGLLCVMLGRLDSLWSSIVIMCCFSVFVQAASGLTFGVVPFVSKSSLGVISGMTGSGGTIGAVVTQMLLFSGDNLSKQTSISLMGLMMILCTLPVTLIYFPQWGGIFYAPSPHYDYGYDQENYTLLE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00950 442 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 438 IPR044772 GO:0015112
Vivi6g00950 442 CDD MFS_NRT2_like 28 412 IPR044772 GO:0015112
Vivi6g00950 442 SUPERFAMILY MFS general substrate transporter 13 414 IPR036259 -
Vivi6g00950 442 Gene3D MFS general substrate transporter like domains 22 216 IPR036259 -
Vivi6g00950 442 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 412 IPR020846 GO:0022857
Vivi6g00950 442 FunFam Probable high-affinity nitrate transporter 2.4 20 217 - -
Vivi6g00950 442 FunFam Nitrate transporter 2.1 219 420 - -
Vivi6g00950 442 Pfam Major Facilitator Superfamily 32 378 IPR011701 GO:0022857|GO:0055085
Vivi6g00950 442 Gene3D MFS general substrate transporter like domains 219 419 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00950 Vivi-Chr6 29582700 29599678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00950 8 425 Inorganic Solute Cotransporters AT5G14570 63.781 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00950 K02575 - qsa:O6P43_008930 652.899