Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00949 ATGGAAAAACAGCATCCCATGAGCCACGAGAAAGCAACCGAGTTTCGACCATTCTCGGTGGTAACACCTCATATGCGTACATTTCACCTATCATGGTTCAACCTCTTCTCCTGTTTCTTCACCACCTTCTCCATCCCTCCTCTCCTCCCAGTCATCCGCCACGACCTCAACCTCACAGCCGGTGACATAGGCAGAGCAGGTTCCGCTTCTTTCGCCGGCTCCATCCTCTCCCGCCTACTGATGGGCCCAATCTGCGACCTCGTGGGTCCCCGTAGAGCCTCGGGTATTCTTTCTCTCATAACCGCTCCCATCATCCTCCTCACCTCCATTGCCTCTACTCCTGGCGAATTCATCCTAGTTCGTTTCCTCGTAGGCTTCTCCCTCGCCAATTTCGTCGCAAATCAGTTCTGGATGAGCTCTATGTTTGACGAATCCGTTGTTGGGTCAGCCAACGCTTTCTCCGCTGGCTGGGCAAACACCGGTTCCGGCGTCACTCAACTTGTGATGCCTTTAATTTACTCCTCTCTCGTCACGTATCTTCCATCCTCCACCGCTTGGCGGGTATCATTTATAGTTCCCGCCGTTTTCCAAACGGTTACAGGTGTGTTAGTTTTAGCATTCGGCCATGAGGCAAACAAAATTCCATCAGAACCAAAGGAGAATACATTGAAAGTGATATTTGGTGGGTTAAGGGATTACAGAGGATGGATACTGGGGTTACTATATGGATTCTCGTTTGGGGTTGAAATGACAACGGATAACATAATAGCGCAATATTTTTATGACAGATTTGGGGTGAACCTAGAAACAGCAGGAATTATTGCAGCATGTTTTGGAATCACGAATTTGTTTTCAAGACCAATGGGAGGGATGGTTTCAGACAAAATGGGGAAGAGGTTTGGTATGAGAGGGAGATTGTGGGGTTTGTGGATTGTTCAAACGGTTGCGGGTTTGCTTTGTGTGATGCTTGGACGACTTGACTCCTTGTGGAGTTCTATTGTTATCATGTGTTGTTTCTCTGTTTTTGTTCAAGCTGCTTCTGGCCTCACGTTTGGTGTGGTTCCCTTTGTTTCTAAAAGGGAGTGGTGGAACAATAGGAGCCGTTGTAACTCAAATGCTGCTATTCTCAGGCGACAACTTATCAAAGCAAACAAGCATATCACTAATGGGCTTAATGATGATATTATGTACTCTTCCTGTTACCTTAATCTACTTCCCTCAATGGGGTGGCATCTTTTATGCTCCTTCTCCACATTATGA 1260 0.469 MEKQHPMSHEKATEFRPFSVVTPHMRTFHLSWFNLFSCFFTTFSIPPLLPVIRHDLNLTAGDIGRAGSASFAGSILSRLLMGPICDLVGPRRASGILSLITAPIILLTSIASTPGEFILVRFLVGFSLANFVANQFWMSSMFDESVVGSANAFSAGWANTGSGVTQLVMPLIYSSLVTYLPSSTAWRVSFIVPAVFQTVTGVLVLAFGHEANKIPSEPKENTLKVIFGGLRDYRGWILGLLYGFSFGVEMTTDNIIAQYFYDRFGVNLETAGIIAACFGITNLFSRPMGGMVSDKMGKRFGMRGRLWGLWIVQTVAGLLCVMLGRLDSLWSSIVIMCCFSVFVQAASGLTFGVVPFVSKREWWNNRSRCNSNAAILRRQLIKANKHITNGLNDDIMYSSCYLNLLPSMGWHLLCSFSTL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00949 419 CDD MFS_NRT2_like 28 361 IPR044772 GO:0015112
Vivi6g00949 419 SUPERFAMILY MFS general substrate transporter 13 358 IPR036259 -
Vivi6g00949 419 Gene3D MFS general substrate transporter like domains 22 216 IPR036259 -
Vivi6g00949 419 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 419 IPR020846 GO:0022857
Vivi6g00949 419 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 361 IPR044772 GO:0015112
Vivi6g00949 419 FunFam Probable high-affinity nitrate transporter 2.4 20 217 - -
Vivi6g00949 419 Gene3D MFS general substrate transporter like domains 219 380 IPR036259 -
Vivi6g00949 419 Pfam Major Facilitator Superfamily 32 346 IPR011701 GO:0022857|GO:0055085
Vivi6g00949 419 FunFam Nitrate transporter 2.1 219 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00949 Vivi-Chr6 29582699 29599678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00949 8 361 Inorganic Solute Cotransporters AT5G14570 62.933 1.18e-169 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00949 K02575 - qsa:O6P43_008930 552.362