Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00932 ATGAGGAAGAAAAGTACTCCATATTGTTCTTTTCAATATCCATCTTGGTACTATGATCTTAAACACACACAACCTTTAAGAGGGAATCAATGTGACAACAATGATAATTCTGAGAAAGTGAAACATGCATGTAATGTTTGCAGTAAAGATTTTCAGTCTAAAAAGGCTTTGAATGGGCACATGAGAATACACAAAAAAGATAACAAGGGTATTCCTCCGCCACCAATTTCATCTCCTCAGAATATTGACTTATCAAAATATTTGCCCGAAAAATCGCATAAATGCAGCAAGAGGAATAGTGATATCAATACTATTGATAATGATCATGGTGACAGGAAAAAGCTGAAGCTTAGCAGCATATTGGTGTTGAAATTCAAGACTGTTAAAAAAAAATTAATAATAGAAGATTATAGTTATAGTTACTTGTTATTTCAATATCATGAACATGAGTATTGTGATTGTTTGCATTCATGA 474 0.3207 MRKKSTPYCSFQYPSWYYDLKHTQPLRGNQCDNNDNSEKVKHACNVCSKDFQSKKALNGHMRIHKKDNKGIPPPPISSPQNIDLSKYLPEKSHKCSKRNSDINTIDNDHGDRKKLKLSSILVLKFKTVKKKLIIEDYSYSYLLFQYHEHEYCDCLHS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00932 157 SMART c2h2final6 42 64 IPR013087 -
Vivi6g00932 157 SUPERFAMILY beta-beta-alpha zinc fingers 40 67 IPR036236 -
Vivi6g00932 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Vivi6g00932 157 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 32 102 - -
Vivi6g00932 157 Gene3D Classic Zinc Finger 39 108 - -
Vivi6g00932 157 MobiDBLite consensus disorder prediction 64 83 - -
Vivi6g00932 157 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Vivi6g00932 157 FunFam Zinc finger protein 42 65 - -
Vivi6g00932 157 Pfam C2H2-type zinc finger 42 66 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi6g00932 zf-C2H2_6 2.3e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00932 - K26583 vvo:131636698 195.282