Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00921 ATGGATGTTGAAAACCAAAATCCAGATTCAAGCTTTCCGTTCTGGAAACCCGTTCCTCGCAGGTTCCAACCCGATTCACCTTTCTTCGCTATCGGTAACCTCGAACGGGAACTTCTTGTCAAACAGGTTGCGTTGGAATTTACAGAAGAGAAGGAACAGATTGAGAGTTTTATACAAGAAGATGATAGGGAAGTCTTCTGTCCTATTGTTGGGTGTGGAGCGCGTTTGGCTTCAATGGATGACTTCGAAAATCACTATAATGCAAGACATACTGCATCCTGTTCTGTGTGTTCTAGAGTCTATCCAACGTCACGTTTGCTCAGCATACATGTATCCGAAGCTCATGATTCTTTCTTTCAGGCAAAAGTTGCACGCGGCTATGACATGTATGAATGCTTAGTGGAAGGGTGTGGTTTGAAATTCAAAAGCTACAAAAGTAGGCAGCAGCATCTGGTCGACAAGCATAAATTCCCGACATCGTTTGAGTTTTTCAAGAAGGCTCTGCCGTCAAGAAAACAGAGGATGAAGTCTCAGCGCAAAAAACCTTCTCATAAGGAGGATACTTCAGGAATGATGGAAGTGGAAAATGCAGCCATGGATGACCTTGTCTCAGCAGTCTCTAGATTGAATACAACGGACTCCACTCCTTCCTCTATCAGCTTTGGTCGTCGTAATACCAAAGGCTTGTCATTTGTCCCTCGGGCTGTTCAGCATGGGAAGGGGTCAAACTCGGGTTCATCCGTAACTAAGAGATCATAA 759 0.444 MDVENQNPDSSFPFWKPVPRRFQPDSPFFAIGNLERELLVKQVALEFTEEKEQIESFIQEDDREVFCPIVGCGARLASMDDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFPTSFEFFKKALPSRKQRMKSQRKKPSHKEDTSGMMEVENAAMDDLVSAVSRLNTTDSTPSSISFGRRNTKGLSFVPRAVQHGKGSNSGSSVTKRS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00921 252 PANTHER UNCHARACTERIZED 9 239 IPR039258 -
Vivi6g00921 252 ProSitePatterns Zinc finger C2H2 type domain signature. 94 115 IPR013087 -
Vivi6g00921 252 ProSitePatterns Zinc finger C2H2 type domain signature. 132 155 IPR013087 -
Vivi6g00921 252 MobiDBLite consensus disorder prediction 209 252 - -
Vivi6g00921 252 MobiDBLite consensus disorder prediction 169 192 - -
Vivi6g00921 252 SMART c2h2final6 92 115 IPR013087 -
Vivi6g00921 252 SMART c2h2final6 130 155 IPR013087 -
Vivi6g00921 252 SMART c2h2final6 65 90 IPR013087 -
Vivi6g00921 252 MobiDBLite consensus disorder prediction 237 252 - -
Vivi6g00921 252 MobiDBLite consensus disorder prediction 209 225 - -
Vivi6g00921 252 ProSitePatterns Zinc finger C2H2 type domain signature. 67 90 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00921 12 247 C2H2 Transcription Factor Family AT5G14140 64.898 5.95e-115 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi6g00921 None None None