Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00903 ATGACAAAAAATTATGAAGGACGTGCAGTAGGAATAGACCTTGGAACAACCTATTCTTGTGTTGCTGTGTGGCTTGATGAGCACAATAGAGTAGAGATAATCCACAATGAACAAGGTAATAGAACCACACCTTCCTTTGTTGCTTTCACTGATAATCAAAGGTTGATCGGTGATGCTGCTAAGAATCAGACTGCCTCTAATGCAGAAAACACCGTCTTTGATGCTAAGAGATTAATTGGCAAGACGTTTAGTGATTCTGTTGTTAAAAAAGATATGATGTTATGGCCATTCAAAGTAATCACCGATGTGAATGACAAACATGTGATTGTTGTTAAGTACAAAGGTGAGGAGAAGCATTTTTGTGCTGAGGAAATTTCATCTATGATCCTCACAAAAATGCGAGAGACTGCAGAAAAATTTCTAGAGTCTCCGCGAAAAGCCATAATAGACGCTGGTGTCATTGCGGGTCTTAATGTTATACGGATCATCAATGAACCAACTGCGGCTGCTCTTGCAAATGGACTTGATAAGAGATATAACTGTGTTGGAGAAAGGAATATTTTTGTTTTTGACTTTGGTGGTGGCACTTTTGATGTGTCGATCTTAACAATCAAGGATAAGGTCTTCCAAGTTAAGGCCACTGGCGGAAACACTCACCTTGGAGGAGAGGACATTGATAACCGGATGGTGAACTACTTTGTCGATGAGTTCAAGAGGAAGAACAAACTGGATATTACTGGGAACTCTAGGGCTTTGAGGAGGTTGAGAACGGCTTGTGAAAAGGCAAAAAGGGTACTCTCTTTTTCTGTTGTCACCACAATTGAGGTAGACTTTTTATTTCAAGGTATTGACTTCTTTTCATCGATTACTTGTGCCAAATTTGAGGAAACCAATATGGACATTTTTAACGAGTGTATGGAGACCGTCAAGAGTTGTCTTACCGACGCTAAGATGAACAAGAGTACTGTAAATGATGTTGTTCTTATTGGTGGGTCGTCTAGGATTCCCAAAGTGCAGCAACTATTGCAGGAATTTTTCAACGGAAAGGATTTATGCGTGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTACAGGCTGCTTTGTTGAGTAAAGGCTGTAAAAATGTTCCAAACTTGGTGCTTCGCGATGTTACACCACTGTCTCTTGGTAAGGAAATAGTAGGAGATGTCATGAATGTTGTGATTCCTAGGAACACTAGCATTCTCGACAAGATGACACAAAGTTTTGTAACAACTTACGATAACCAATCTTACATCTCGAATGACGTTTATGAGGGTGAGAGAACTAGAGCCAGTGATAACAATCTGCTAGGCTCTTTTACTCTTTTGAACATTCCCCCTGCACCTCGCGGCTATTGTATCAATGTATGTTTTGCTATAGACGAAAATGGTATTTTGACTGTGACTGCTAAGGACAAATCCACCGGCAATATGAATGCGATTACCATAAACAAGTACAAAGATAGTTTGTCTTCTAAAAATGTTAAAAATATGATTAAAGAAGCTGAGAAGTTTAAGGTGGAAGATAAGAAATTTTTAAGGAAGGCTAATGCAATGAATGCATTAGATTTAAGTGTTTACAATATGAAGAATGCGTTAGAGAAGGATGTTAATGTAAAGCTGACTGCTCAAGAACGTGAGGACATCAACAATGCGATGAGTGTGGCCAAGAATTTGCTTGACAAGAATAACCAAGGGAAGAAAGATTTTGATTTTCTTGAGGGTCATCAGAAGAAGCTGGAGAACATGTTGAAACTCATTAAAGCCAAAACCAGCAAGGAGAAGAACCACAAATTTTCTTTTTTGAGATTTCTTTTCAAGTGA 1854 0.391 MTKNYEGRAVGIDLGTTYSCVAVWLDEHNRVEIIHNEQGNRTTPSFVAFTDNQRLIGDAAKNQTASNAENTVFDAKRLIGKTFSDSVVKKDMMLWPFKVITDVNDKHVIVVKYKGEEKHFCAEEISSMILTKMRETAEKFLESPRKAIIDAGVIAGLNVIRIINEPTAAALANGLDKRYNCVGERNIFVFDFGGGTFDVSILTIKDKVFQVKATGGNTHLGGEDIDNRMVNYFVDEFKRKNKLDITGNSRALRRLRTACEKAKRVLSFSVVTTIEVDFLFQGIDFFSSITCAKFEETNMDIFNECMETVKSCLTDAKMNKSTVNDVVLIGGSSRIPKVQQLLQEFFNGKDLCVSINPDEAVAYGAAVQAALLSKGCKNVPNLVLRDVTPLSLGKEIVGDVMNVVIPRNTSILDKMTQSFVTTYDNQSYISNDVYEGERTRASDNNLLGSFTLLNIPPAPRGYCINVCFAIDENGILTVTAKDKSTGNMNAITINKYKDSLSSKNVKNMIKEAEKFKVEDKKFLRKANAMNALDLSVYNMKNALEKDVNVKLTAQEREDINNAMSVAKNLLDKNNQGKKDFDFLEGHQKKLENMLKLIKAKTSKEKNHKFSFLRFLFK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00903 617 Gene3D - 73 128 - -
Vivi6g00903 617 ProSitePatterns Heat shock hsp70 proteins family signature 2. 189 202 IPR018181 -
Vivi6g00903 617 SUPERFAMILY Actin-like ATPase domain 184 372 IPR043129 -
Vivi6g00903 617 FunFam Heat shock 70 kDa protein 375 529 - -
Vivi6g00903 617 FunFam Heat shock 70 kDa 221 304 - -
Vivi6g00903 617 SUPERFAMILY Actin-like ATPase domain 9 177 IPR043129 -
Vivi6g00903 617 Gene3D - 529 609 IPR029048 -
Vivi6g00903 617 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi6g00903 617 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 378 533 IPR029047 -
Vivi6g00903 617 Gene3D - 178 352 - -
Vivi6g00903 617 FunFam heat shock 70 kDa protein-like 73 128 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 132 152 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 195 205 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 461 477 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 355 375 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 60 68 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 381 400 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi6g00903 617 PRINTS 70kDa heat shock protein signature 323 339 - -
Vivi6g00903 617 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 376 528 IPR029047 -
Vivi6g00903 617 Pfam Hsp70 protein 9 594 IPR013126 GO:0005524|GO:0140662
Vivi6g00903 617 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 528 602 IPR029048 -
Vivi6g00903 617 Gene3D Actin; Chain A, domain 4 221 304 - -
Vivi6g00903 617 PANTHER HEAT SHOCK PROTEIN 70KDA 9 558 IPR013126 GO:0005524|GO:0140662
Vivi6g00903 617 ProSitePatterns Heat shock hsp70 proteins family signature 3. 326 340 IPR018181 -
Vivi6g00903 617 Gene3D - 10 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00903 Vivi-Chr6 27469196 27477814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00903 1 600 Calmodulin-binding Proteins AT3G12580 60.420 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00903 K03283 - gmx:102667572 811.601