Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00893 ATGGCCAAAAAGTATGAGGGACCGGCTATTGGAATTGATCTGGGCACAACCTACTCCTGTGTTGCTGTATGGCAGGATCAAAACAATAGAGCAGAGATCATACATAATGATCAAGGGAACAAGACTACTCCTTCTTTTGTTGCTTTTACTAATGATCAAAGATTGATCGGTGAAGCTGCAAAAAATCAGGCTGCTTCAAACCCAACAAACACTGTTTTTGATGCAAAGAGGTTGATTGGAAGGAAATTTAGTGACTCAGTTATTCAGAATGACATACAATTGTGGCCATTTAAGGTTGTGTCTGGAAATGATGACAAACCTGAGATCATTGTTAAGTATAAGGGTGAAGAAAAACGCCTTTGTGCTGAAGAAATATCATCTATGATTCTCATGCATATGTGTGACATTGCAGAGAAATTTTTGGAGTCACCGGTCAAGAACGCAGTGGTTACTGTGCCGGCTTATTTCAATGATTCTCAGAGAAAAGCCACAAAAGATGCTGGTGCTATTGCTGGACTCAATGTAATGCGGATAATTAATGAACCAACTGCGGCTGCTCTTGCATATGGACTTCAAAAGAGAGCAAATAATGTGGGAAAACGAAATGTGTTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTCTCCTCACACTCAAAGATGATAGCTTTGATGTGAAAGCCACTGCCGGAGATACTCATCTTGGAGGAGAGGACTTTGATAGTAGAATGGTGAACCATTTAGTGAATGAACTTAAGAGGAAGAGTAAAGTGGACATAAGTGCGAACCCGAGAGCACTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCTAAAAGGACATTGTCATTTGATACTGAGACTACTATTGACATAGATGCTTTGTATGAGGGAGTTGACTTCTATTCTTTAGTCACTAGAGCGAAATTTGAACAACTCAACATGGAATTGTTTGAAAAGTGTATGGAGATTGTGAAGAGTTGTCTTGCTGATGCTAAGATGGAGAAGAGTAGTATAGATGATGTTGTCCTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGAAGCAATTATTGCAGGACCTTTTCAAGGGGAAGGAATTATGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGAGCAGCGGTTCAGGCTGCTTTGCTTTGTGAAGGTATTAAGAATGTTCCAAACTTAGTACTGCATGACGTAACACCTTTGTCACTTGATAACCAATCTATTGCCTATATTGAGGTCTATGAGGGTGAAAGAATGGTTGCAAGCGAGAACAATTTGCTTGGCTGGTTTAATCTCTCAGTTCGTCGTGCACCTCGTGGACTTCCCATTCAGGTATGCTTTTCTATCGATGCTGATGGTATATTAAACGTGTCTGCAGAGGAAGAGACAAGTGGTAATAAGAAAGATATTACAATAACAAATGAAAATGGGAGACTGTCAAGCCAAGAAATCGAGAGAATGATAGAGGAAGCTGAGCACTTCAAATCTGAAGATATGAAGCATGTGAAGAAGAGTAAAGCAATGCGTGCTTTGGATGACTATGTTTATAATATGAAGAAAGTAATGAATGATAATAGCGTAACTTCCAAGCTCACTGCTGTTGACAAGGTGAAGATCAATTCTGCAATGACAAAGGGAGAAGACTTGATTGATGACAAAGATCAAGAAACATTTGTGTTTGTGGACGTTCTGAGGGAGCTTGAGAGCATCTTTGAATCAGCAATGAAAAAGATCAACAAAGGTTACTCCGAAGACGAAAGTGTTTCTGATTTTTAA 1791 0.4009 MAKKYEGPAIGIDLGTTYSCVAVWQDQNNRAEIIHNDQGNKTTPSFVAFTNDQRLIGEAAKNQAASNPTNTVFDAKRLIGRKFSDSVIQNDIQLWPFKVVSGNDDKPEIIVKYKGEEKRLCAEEISSMILMHMCDIAEKFLESPVKNAVVTVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAALAYGLQKRANNVGKRNVFIFDLGGGTFDVSLLTLKDDSFDVKATAGDTHLGGEDFDSRMVNHLVNELKRKSKVDISANPRALRRLRTACERAKRTLSFDTETTIDIDALYEGVDFYSLVTRAKFEQLNMELFEKCMEIVKSCLADAKMEKSSIDDVVLVGGSSRIPKVKQLLQDLFKGKELCKSINPDEAVAYGAAVQAALLCEGIKNVPNLVLHDVTPLSLDNQSIAYIEVYEGERMVASENNLLGWFNLSVRRAPRGLPIQVCFSIDADGILNVSAEEETSGNKKDITITNENGRLSSQEIERMIEEAEHFKSEDMKHVKKSKAMRALDDYVYNMKKVMNDNSVTSKLTAVDKVKINSAMTKGEDLIDDKDQETFVFVDVLRELESIFESAMKKINKGYSEDESVSDF 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00893 596 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 211 221 - -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 60 68 - -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 371 391 - -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 148 168 - -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 339 355 - -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi6g00893 596 PRINTS 70kDa heat shock protein signature 397 416 - -
Vivi6g00893 596 FunFam heat shock 70 kDa protein-like 73 128 - -
Vivi6g00893 596 FunFam Heat shock 70 kDa 237 320 - -
Vivi6g00893 596 Gene3D - 194 368 - -
Vivi6g00893 596 FunFam Heat shock protein 70 10 201 - -
Vivi6g00893 596 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Vivi6g00893 596 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Vivi6g00893 596 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi6g00893 596 PANTHER HEAT SHOCK PROTEIN 70KDA 9 546 IPR013126 GO:0005524|GO:0140662
Vivi6g00893 596 Pfam Hsp70 protein 409 582 IPR013126 GO:0005524|GO:0140662
Vivi6g00893 596 Pfam Hsp70 protein 9 408 IPR013126 GO:0005524|GO:0140662
Vivi6g00893 596 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Vivi6g00893 596 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 513 IPR029047 -
Vivi6g00893 596 Gene3D - 513 585 IPR029048 -
Vivi6g00893 596 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 512 586 IPR029048 -
Vivi6g00893 596 Gene3D - 10 386 - -
Vivi6g00893 596 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 406 512 IPR029047 -
Vivi6g00893 596 Gene3D - 73 128 - -
Vivi6g00893 596 Gene3D Actin; Chain A, domain 4 237 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00893 Vivi-Chr6 27377052 27379342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00893 1 590 Calmodulin-binding Proteins AT3G12580 63.200 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00893 K03283 - gmx:102667578 776.163