Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00885 ATGGCCAAGAAATATGAGGAAGTTGCTATAGGAATTGATCTTGGCACAACCTACTCATGTGTTGGAGTGTGGCAAGAACAAAACGACCGTGTTGAAATAATTCACAATGATCAAGGAAAATATAGTGATTCTGTTATTCAAAATGATATTCTACTGTGGCCCTTTAAGGTAATTGCCGGGGATAATGACAAACCAATGATCCTTGTGAACTATCAGGGTAAGGAAAAACAACTTGTTGCTGAGGAAATATCAGCCATGATTCTCACACAGATGCGAGAGATTGCCGGAGCATTTTTGGAATCACCTGTTAAGAATGCAGTGATTACCGTACCTGCTTATTTTAATGATTCGCAGCGAAGAGCCACCAAAGACGCGGGTAATATTGCTGGCCTCAACGTAATGCGGATAATTAATGAACCAATTGCGGCGGCTCTAGCATATGGCCTTCAAAAGAGGGCTAATTGTGTTGAAGAGAGAAATATTTTCATCTTTGATCTTGGTGGTGGAACGTTTGATGTGTCTCTCCTTACTATTAAGAATAATGTCTTTGAAGTCAAGGCGACTGCCGGTGACACTCATCTTGGAGGAGAAGACTTTGATAATCGAATGGTGAATCACTTTGTGAAGGAGTTTAAGAGGAAGAACAAAGTTGACATTAGTGGGAACTCAAAAGCCTTGAGGAGATTAAGAACTGCGTGCGAGAGGGCAAAAAGAACACTTTCGTACGATACTGATGCAACAATTGACATAGATGTTATATGTGAGGGTATTGATTTCTGTTCATCAATTACTCGGGCCAAGTTTGAGCAACTGAATATGGACCTCTTTGAAAAGTGTATGGAGACCGTTGAAAGTTGTCTTGCTGATGCTAAGATGGACAAGTGTAGGGTTGATGACATTGTCCTGGTTGGTGGCTCTTCTAGGATTCCCAAAGTGAAACAGTTGTTGCAGGACTTTTTCAAGGGAAATGAATTATGCAAGAGCATTAATCCTGACGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTATTGAGTGATGGTGTTAAGAGTGTTCCAGGCATAGTATTGCGAGATGTTACCCCGCTGTCGCTTGGTGTAGCAATTGAAGGAGATCTCATGGATGTTGTGATTCCTAGGAATACTTCCATTCCTGTCAGAAAGACAAACACATACTATACAGTGGAAGATAACCAATCCAGTGTCATGGTTGAGGTGTACGAGGGTGAGAGAATAAGAGCCAGCGATAACAACTTGCTTGGTTTGTTTGATTTCTCTGTTCCTCCTGCTCCTCAAAGTAGCTTTCCTATCAAAGAATGCTTTTCTATAGATGAAGATGGTATATTAAATGTGTCGGCAGAGGAAGAAACAAGTGGCAACAAGAAAGATATTACAATAACCAATAAAAATGGAAGACTCTCAAGGGAAGAAATTGAGAGAATGATTCAAGAAGCTGAATTTTTCAAAGCTCAAGACATGAAGTTCAAAAAGAAAGTTAAAGCAATAAATGCGTTGGACGATTATCTCTACACCGTGAGGAAAGTAATGAAGGATGATTGTGTTAGTTCCAAGCTCAACCCTGTTGACAAAGTGAAGATCAATTCTGCAATAATAAAGGGAAAAACTTTGATTGATGGCAACCACGAGGAAGATACGTCTGTGTTTGTAGACCTTCTGAAGGAACTTGAGAGCATTTTTGAATCTGCTATGAACAAAGTCAACAAAGGTTACTCAGACGAGGAAAGTGATTAG 1755 0.404 MAKKYEEVAIGIDLGTTYSCVGVWQEQNDRVEIIHNDQGKYSDSVIQNDILLWPFKVIAGDNDKPMILVNYQGKEKQLVAEEISAMILTQMREIAGAFLESPVKNAVITVPAYFNDSQRRATKDAGNIAGLNVMRIINEPIAAALAYGLQKRANCVEERNIFIFDLGGGTFDVSLLTIKNNVFEVKATAGDTHLGGEDFDNRMVNHFVKEFKRKNKVDISGNSKALRRLRTACERAKRTLSYDTDATIDIDVICEGIDFCSSITRAKFEQLNMDLFEKCMETVESCLADAKMDKCRVDDIVLVGGSSRIPKVKQLLQDFFKGNELCKSINPDEAVAYGAAVQAALLSDGVKSVPGIVLRDVTPLSLGVAIEGDLMDVVIPRNTSIPVRKTNTYYTVEDNQSSVMVEVYEGERIRASDNNLLGLFDFSVPPAPQSSFPIKECFSIDEDGILNVSAEEETSGNKKDITITNKNGRLSREEIERMIQEAEFFKAQDMKFKKKVKAINALDDYLYTVRKVMKDDCVSSKLNPVDKVKINSAIIKGKTLIDGNHEEDTSVFVDLLKELESIFESAMNKVNKGYSDEESD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00885 584 Gene3D Actin; Chain A, domain 4 195 278 - -
Vivi6g00885 584 Gene3D - 503 584 IPR029048 -
Vivi6g00885 584 PRINTS 70kDa heat shock protein signature 169 179 - -
Vivi6g00885 584 PRINTS 70kDa heat shock protein signature 329 349 - -
Vivi6g00885 584 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi6g00885 584 PRINTS 70kDa heat shock protein signature 355 374 - -
Vivi6g00885 584 PRINTS 70kDa heat shock protein signature 435 451 - -
Vivi6g00885 584 PRINTS 70kDa heat shock protein signature 297 313 - -
Vivi6g00885 584 PRINTS 70kDa heat shock protein signature 106 126 - -
Vivi6g00885 584 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 353 507 IPR029047 -
Vivi6g00885 584 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 351 502 IPR029047 -
Vivi6g00885 584 FunFam Heat shock 70 kDa protein 350 503 - -
Vivi6g00885 584 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 502 577 IPR029048 -
Vivi6g00885 584 ProSitePatterns Heat shock hsp70 proteins family signature 2. 163 176 IPR018181 -
Vivi6g00885 584 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi6g00885 584 Gene3D - 41 86 - -
Vivi6g00885 584 Gene3D - 1 40 - -
Vivi6g00885 584 FunFam heat shock 70 kDa protein-like 39 86 - -
Vivi6g00885 584 ProSitePatterns Heat shock hsp70 proteins family signature 3. 300 314 IPR018181 -
Vivi6g00885 584 SUPERFAMILY Actin-like ATPase domain 8 151 IPR043129 -
Vivi6g00885 584 FunFam Endoplasmic reticulum chaperone BiP 4 162 - -
Vivi6g00885 584 Gene3D - 152 326 - -
Vivi6g00885 584 FunFam Heat shock 70 kDa 195 278 - -
Vivi6g00885 584 Gene3D - 87 344 - -
Vivi6g00885 584 Pfam Hsp70 protein 40 571 IPR013126 GO:0005524|GO:0140662
Vivi6g00885 584 SUPERFAMILY Actin-like ATPase domain 158 346 IPR043129 -
Vivi6g00885 584 PANTHER HEAT SHOCK PROTEIN 70KDA 9 536 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00885 Vivi-Chr6 26974948 26976733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00885 1 577 Calmodulin-binding Proteins AT3G12580 61.192 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00885 K03283 - gmx:102667578 779.245