Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00868 ATGGCCAAAAAATATGAGGGACCTGCAATTGGAATCGACCTTGGCACGACCTATTCATGTGTCGCTGTATGGCAGGGCCAAAACAATAGAGCTGAGATCATAAACAATGATCAAGGAAACAGAACAATACCTTCTTTTGTTGCATTTACTAATGCTCAAAGATTGATAGGTGAAGCTGCCAAATATCAGGCCGCCTCCAATGCTTCAAACACTATTTATGATGCAAAGAGATTAATTGGAAGAAAATACAGTGATATCATTACTCAGAATGATATTCTATTGTGGCCCTTTAAGGTCATCGCCGGTAATGATGACAACCCCGTGATTCTTGTTAACTACAAGGGTGAAGAAAAGCGTTTTTCTGCTGAAGAAATATCATCTATGGTTCTCACAAAAATGAGGGAGATTGCAGAAAAGTTCTTGGAGTCACCTGTTAAGAATGCAGTGATTACTGTTCCGGCATATTTCAACGATTCTCAGCGGAAAGCCACAAAAGATGCTGTTGCCATTGCTGGCATGAATGTAATGCGGATAATCAATGAACCAACTGCGGCGGCTCTTGCATATGGACTTCAAAAGAGAGCTAATTGTGTTGAAGAGAGAACTATTTTCATCTTTGATCTTGGTGGTGGAACTTTTGATGTGTCTCTCCTTACTATTAAGAATAATGTCTTTAAAGTTAAGGCCACTGCTGGAGATACTCATCTCGGAGGAGAGGACTTTGATAATAGAATGGTGAACCACTTTGTAGAGGAGTTCAAGAGGAAGCACAAGAAGGACATAAGAGGGAACCCAGGATCCTTGAGGAGGTTGCGAAGTAGCTGCGAGAGGGCAAAAAGGACTCTTTCATTTGCTTCTGTCACTACTATTGATGTAGTAGCTTTATTTGAAGGCATTGATTTGTATTCATCTATCACTCGAGCAAAGTTTGAGGAAATCAACATGGATCTCTTTGAAAAGTGCATGAAGATTGTCAATAGATGCTTTTGGGATTCTGGAGTGGACAAGAGTAGTGTAGATGATGTTGTCCTTATTGGAGGCTCGTCTAGAATCTCCAAATTGCAACAGCTTTTGCAAGACTTTTTTAAGGGTAAGGATTTGTGCATGAGCATCAACCCCGATGAAGCCGTTGCTTATGGTGCAGCAGTCCAGGCTGCTTTGTTGATCGATGGCATTAAGAATATTTCAGACATGGTGTTGCAAGATGTTACCCCGTTGTCTCTCGGTACTTCAGTAGATGAAGATATCATGGATGTTATAATTCCAAAAAACACTTCCATTCCTGTCATTAAGTCTAAAAACTATAAAACAGTTTATGATAATCAATCCTGCGTCTTGGTTGATGTCTATGAGGGTGAGAGAATGAATGCCAGTAATAACAACTTGCTAGGTTCATTTGATTTTTCAGTTCCTCCTGCTCCTCAAGGCCATATTCCTATCAAAGTACACTTTTCTATAGATGGTGATGGTATATTAAATGTATCTGCAGAGGAAGAAACCAGTGGTAATAGAAAAGATATTACAGTAACTAATGAAAATGGAAGACTCTCTAGCAAAGAAATTGAGAGAATGATTAAAGAAGCTGAGAGTTTTAAGGCTGAAGATACGAAACTTGAGCAGAAAGTTAAAGCAAAAAATGACTTGAATGATTATCTTTGCCAAGTGAGGAAAGTAATTGCTGATAATGATGTTAGTTCTATGATTTCTCCTGTTGACAAGTTGAAGATCTATACTGCTGTTGTGAAGGGCCAAAAATTGTTGGATGGCAATAAGAATGAAGAAGCCAATGTGTTTGTTGAGTTTTTGAAGGATTTAGAGAGCATGGTTGATTCTGCTTTGTACAAGATCACAAATGGAGTTTGA 1863 0.3892 MAKKYEGPAIGIDLGTTYSCVAVWQGQNNRAEIINNDQGNRTIPSFVAFTNAQRLIGEAAKYQAASNASNTIYDAKRLIGRKYSDIITQNDILLWPFKVIAGNDDNPVILVNYKGEEKRFSAEEISSMVLTKMREIAEKFLESPVKNAVITVPAYFNDSQRKATKDAVAIAGMNVMRIINEPTAAALAYGLQKRANCVEERTIFIFDLGGGTFDVSLLTIKNNVFKVKATAGDTHLGGEDFDNRMVNHFVEEFKRKHKKDIRGNPGSLRRLRSSCERAKRTLSFASVTTIDVVALFEGIDLYSSITRAKFEEINMDLFEKCMKIVNRCFWDSGVDKSSVDDVVLIGGSSRISKLQQLLQDFFKGKDLCMSINPDEAVAYGAAVQAALLIDGIKNISDMVLQDVTPLSLGTSVDEDIMDVIIPKNTSIPVIKSKNYKTVYDNQSCVLVDVYEGERMNASNNNLLGSFDFSVPPAPQGHIPIKVHFSIDGDGILNVSAEEETSGNRKDITVTNENGRLSSKEIERMIKEAESFKAEDTKLEQKVKAKNDLNDYLCQVRKVIADNDVSSMISPVDKLKIYTAVVKGQKLLDGNKNEEANVFVEFLKDLESMVDSALYKITNGV 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00868 620 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 548 IPR029047 -
Vivi6g00868 620 SUPERFAMILY Actin-like ATPase domain 199 388 IPR043129 -
Vivi6g00868 620 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Vivi6g00868 620 FunFam Heat shock 70 kDa 237 320 - -
Vivi6g00868 620 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 618 IPR029048 -
Vivi6g00868 620 Pfam Hsp70 protein 9 605 IPR013126 GO:0005524|GO:0140662
Vivi6g00868 620 Gene3D - 73 128 - -
Vivi6g00868 620 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Vivi6g00868 620 FunFam heat shock 70 kDa protein-like 73 128 - -
Vivi6g00868 620 Coils Coil 521 541 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 371 391 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 38 50 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 339 355 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 211 221 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 60 68 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 397 416 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 477 493 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 8 21 - -
Vivi6g00868 620 PRINTS 70kDa heat shock protein signature 148 168 - -
Vivi6g00868 620 Gene3D - 194 368 - -
Vivi6g00868 620 PANTHER HEAT SHOCK PROTEIN 70KDA 9 562 IPR013126 GO:0005524|GO:0140662
Vivi6g00868 620 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Vivi6g00868 620 FunFam Heat shock 70 kDa protein 392 545 - -
Vivi6g00868 620 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 544 IPR029047 -
Vivi6g00868 620 Gene3D - 10 386 - -
Vivi6g00868 620 FunFam Heat shock protein 70 10 203 - -
Vivi6g00868 620 Gene3D Actin; Chain A, domain 4 237 320 - -
Vivi6g00868 620 Gene3D - 545 618 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00868 Vivi-Chr6 26608198 26610190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00868 1 619 Calmodulin-binding Proteins AT3G12580 62.963 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00868 K03283 - gmx:102667578 793.112