Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00828 ATGGAGATAACATCCTTCGCATCGCACAGTTACTCCGACCTCCCCTCCGCCGCCATGCCGTCCAACGCCTCCGGTTCATCTCGTCCTATCAGAGTCATCCCTATGCAACACCCGAACGCTGCGTCTTCCTCTTCGCTTCCTCCGAATGTCGCGTTTTCACAGTGGACTTCAAAGCTCCGGCGAATGACGTGGCTCGAATGGTTAGAGTTTTTTCTCCCGTGTTCCCGATGGATTCGCATCTACAAATGGCGCGAGTATTTTCAGGTGGATCTTATGGCTGGTATCACCGTCGGAGTTATGCTCGTTCCTCAGTCGATGTCATATGCAAAATTGGCCGGACTTCAACCAATATATGGACTCTACTCTGGGTTTGTGCCTATATTTATGTACGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTTGGTCCGGTAGCATTGGTTTCTCTTTTGGTCTCTAATGTTCTTGGTAGCGTAGCTGATACGTCCAGTGAATTATACACAGAGTTGGCAATTTTATTGGCACTTATGGTTGGGGTACTGGAGTGCGTAATGGGACTATTGAGGCTTGGGTGGCTGATCCGTTTCATTAGCCATTCTGTAATATCTGGTTTTACAAGTGCTTCAGCTATTGTGATTGGTTTATCTCAAGTAAAATACTTTTTGGGGTATGATATAGACAGAAGTAGCAAGATTATACCGTTGGTTAAAAGTATAATAGCTGGAGCTGATAAGTTTTCATGGCCCCCTTTTGTAATGGGATCAGTTATGCTGGCAATACTTCTTGTCATGAAACATCTGGGAAAATCGAGGAAATACTTGCGATTCTTGAGGGCTTCAGGTCCTCTTACAGCAGTGGTTCTGGGAACGCTTTTTGTAAAAATATTTCACCCACCATCAATTTCTTTGGTGGGAGAGATACCGCAGGGCCTCCCCAAATTTTCTGTTCCGAGAGCTTTCGAGTATGCACAGTCCTTAATTCCAACTGCTTTTCTTATAACTGGTGTGGCTATACTGGAATCTGTAGGAATTGCAAAGGCATTAGCTGCAAAGAATGGGTATGAGCTGGATTCAAATCAAGAGTTGTTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACCACAGGATCCTTTTCAAGATCAGCTGTTAATCATGAAAGTGGTGCTAAATCAGGAGTATCAGGAATAGTTTCGGGGATCTTAATTACATGTGCACTTTTGTTTCTAACGCCACTATTTGAGAGCATACCTCAGTCTGCTCTTGCTGCCATCGTGATCTCTGCTGTGATTGGTCTGGTAGATTATGATGAAGCCATTTTTTTGTGGCGTGTAGATAAAAAAGATTTTCTTCTTTGGACCATTACTAGCACTATGACATTGTTCCTTGGTATTGAGATTGGCGTACTTGTTGGGGTTGGAGTGTCACTTGCTTTTGTCATTCATGAGTCGGCAAATCCTCACATTGCTGTTTTGGGTCGTTTGCCAGGGACAACGGTTTATAGAAATGTTAAACAGTATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTATTGATGCTCCTATCTATTTTGCAAATATCAGTTACATAAAGGACAGGTTGCGGGAATATGAAGTTGTTGTTGACAGCGCTACAAGACGTGGACCCGAGGTAGAAAGAATCAGTTTTGTGATTCTAGAGATGGCGCCTGTGACCTACGTAGACTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAAGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAACCCAGATATTCTGCTTACTTTGTCTAAGTCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTCGTGAGAGTACACGATGCTGTTCAAGTTTGCTTGCAGCATGTTCAAAACTTGAAACCAGGATATGAAAGTTCACAATCATCACGCTCTTCTTCATCAGAAGACAAACCAAGCATGTTCTCACAATTGTTTAAACAGAGAGATAGTCGTACAACTACCGACTTAGAGTCTGGTAATGGAAGACCTCCACTTGCCCCGATCAGAGATTCCCAATCGGAGCCATTGTTGCCAAAAGAACTGCCAAAAGAACGTTGA 2124 0.4341 MEITSFASHSYSDLPSAAMPSNASGSSRPIRVIPMQHPNAASSSSLPPNVAFSQWTSKLRRMTWLEWLEFFLPCSRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPIFMYAIFGSSRQLAVGPVALVSLLVSNVLGSVADTSSELYTELAILLALMVGVLECVMGLLRLGWLIRFISHSVISGFTSASAIVIGLSQVKYFLGYDIDRSSKIIPLVKSIIAGADKFSWPPFVMGSVMLAILLVMKHLGKSRKYLRFLRASGPLTAVVLGTLFVKIFHPPSISLVGEIPQGLPKFSVPRAFEYAQSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGILITCALLFLTPLFESIPQSALAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTMTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANISYIKDRLREYEVVVDSATRRGPEVERISFVILEMAPVTYVDSSAVQALKDLYQEYKLRDIQIAISNPNPDILLTLSKSGLVELIGKEWYFVRVHDAVQVCLQHVQNLKPGYESSQSSRSSSSEDKPSMFSQLFKQRDSRTTTDLESGNGRPPLAPIRDSQSEPLLPKELPKER 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00828 707 MobiDBLite consensus disorder prediction 644 707 - -
Vivi6g00828 707 SUPERFAMILY SpoIIaa-like 512 634 IPR036513 -
Vivi6g00828 707 FunFam Sulfate transporter 31 490 637 - -
Vivi6g00828 707 MobiDBLite consensus disorder prediction 644 671 - -
Vivi6g00828 707 ProSiteProfiles STAS domain profile. 510 634 IPR002645 -
Vivi6g00828 707 Gene3D STAS domain 490 638 IPR036513 -
Vivi6g00828 707 CDD STAS_SulP_like_sulfate_transporter 511 627 - -
Vivi6g00828 707 Pfam STAS domain 511 630 IPR002645 -
Vivi6g00828 707 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Vivi6g00828 707 NCBIfam sulfate permease 73 630 IPR001902 GO:0016020|GO:0055085
Vivi6g00828 707 MobiDBLite consensus disorder prediction 1 25 - -
Vivi6g00828 707 Pfam Sulfate permease family 87 460 IPR011547 GO:0016020
Vivi6g00828 707 PANTHER SULFATE TRANSPORTER 52 645 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00828 Vivi-Chr6 24927624 24936539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00828 5 667 Inorganic Solute Cotransporters AT5G13550 73.145 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00828 K18059 - gmx:100794754 1150.58