Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00824 ATGGCACACAAAGAATTTTCATCCACATCTTTTCCCTCAAATTCTAACCCTCCAAACTCTAACAATGATTCCTCAGAAAACAACCTTAGTATTTTTTCTACACACTCAGATAACCCTTTTACCATGGTGGAAGGCAACAACGAGATCATGGTCTCTCACACCACTACCACCACCAACAACAATGACACATTGGTGATGCCACCATCATCATCTTCACAACTGTCCTCTGATAGGTATATGGATCTCCGTCAAGATCCACCAAAGGTCATTCCCAAATCCTCCACCAAAAAACGAATGGGTAGACCTTTGGGCTCTAAGAACAGGCCCAAAGCACGCGTCATTGTCGAGGAAGACAAGGAAACCTTCACAGAAGTAGTTACACTTCAAATCCCACTTGGAGAAGATATTGTGGAGCATATAATCAAGTATGCTCAACAACGTCAAGCTAACATAATAGTGTCGAGGGGTTTCGGTCTTATTTCTAACATTACCTTTCTTGATCCAGTATCACGTGTCCCATTATTACCCATCGAAGGACCCGTGCATATGACATCTCTATTTGGAACATATATAAATCCAAATTGTGAATGTCCTCCTCGAAAATTCATAACTGATCCACCATGTTCCTCTTTTACCGTATATTTCTCTAGTCCTAATGGATATGTATTTGGTGGAATTGTTGGTGGAAAGGTTAAGGCTGCTGGTGTTATTTTGATTAATGCTACTCTTGTTTGGACAACTTTGTTCCACAGGGCAATCTCCTCCAATAGAAATGTTCGAGAAAATGAAGAGGGTGGACCAATATATGTTGATGGTGGCATCACTAATGTTAATCATGTAGCATATGAATCTGACAACAACAGTAATAACAACAATGTTTTTCATATGCCTACTAGCTTTAATGGTGTGGATGCTAATTCAACTCAATTGAATTATCAACTTCCCTCTCAATATCTTCCTATTGATGAGAACGTCATTGATGAGAACTTCATGCAGTGGAACCACTCCAATCACCCTCATTATTAG 1026 0.3977 MAHKEFSSTSFPSNSNPPNSNNDSSENNLSIFSTHSDNPFTMVEGNNEIMVSHTTTTTNNNDTLVMPPSSSSQLSSDRYMDLRQDPPKVIPKSSTKKRMGRPLGSKNRPKARVIVEEDKETFTEVVTLQIPLGEDIVEHIIKYAQQRQANIIVSRGFGLISNITFLDPVSRVPLLPIEGPVHMTSLFGTYINPNCECPPRKFITDPPCSSFTVYFSSPNGYVFGGIVGGKVKAAGVILINATLVWTTLFHRAISSNRNVRENEEGGPIYVDGGITNVNHVAYESDNNSNNNNVFHMPTSFNGVDANSTQLNYQLPSQYLPIDENVIDENFMQWNHSNHPHY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00824 341 MobiDBLite consensus disorder prediction 1 42 - -
Vivi6g00824 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 60 256 IPR014476 GO:0003680
Vivi6g00824 341 MobiDBLite consensus disorder prediction 83 108 - -
Vivi6g00824 341 MobiDBLite consensus disorder prediction 57 76 - -
Vivi6g00824 341 Gene3D - 124 261 - -
Vivi6g00824 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 239 IPR005175 -
Vivi6g00824 341 ProSiteProfiles PPC domain profile profile. 120 265 IPR005175 -
Vivi6g00824 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00824 Vivi-Chr6 24778813 24779838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00824 96 251 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.747 5.62e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00824 - - vvo:131613388 621.313