Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00768 ATGGAGAATTTTGGAATTCATGGTTCTAATGTGAAGTTTGGAATGACCGATGAACAAGTTGAAATTCTTCGAAAACAAATTGCAGTTTACGCATACATCTCTGAATTACTCATTGATAAGCATAAACACTCTTCTTCTCGCCAACATCTCACTAATGATGTTGGGGTGAGAATGTTTTGTGACTCAAAATTGATCGACAAATTAAGTTTTAGGCAGCGTTGGAAAGCAACAACTCCACAAATTCAAGCTTTGGAGCAAATATATGCAGCTAACCCGAGGAGGCCTCCAAATAAGGAAATCATAAAGAAGATAACCATTGATTTAAGCAAGTATGGGAAAATTACTGAGAGCAATGTATATAATTGGTTTCAGAATAGACGTGCTAGGACAAAGAAGTATAGTAGTGTTGATGCAAAATCAAAAGTAGAAACTACAATTGATTCCAAAGGTAAGATGATTGAACCGGATGAGCTTGCGGCCTTACCTAACGAAAATTTAGGTCACCAAAACACTCAAGTGGGTTCTGACTTTTTACCGTACTTTAATCCCGAAATAGATGACAGTTTTGCGATCTTCTAA 579 0.3661 MENFGIHGSNVKFGMTDEQVEILRKQIAVYAYISELLIDKHKHSSSRQHLTNDVGVRMFCDSKLIDKLSFRQRWKATTPQIQALEQIYAANPRRPPNKEIIKKITIDLSKYGKITESNVYNWFQNRRARTKKYSSVDAKSKVETTIDSKGKMIEPDELAALPNENLGHQNTQVGSDFLPYFNPEIDDSFAIF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00768 192 Pfam Homeodomain 71 132 IPR001356 GO:0003677
Vivi6g00768 192 Gene3D - 73 138 - -
Vivi6g00768 192 ProSiteProfiles 'Homeobox' domain profile. 67 133 IPR001356 GO:0003677
Vivi6g00768 192 CDD homeodomain 71 132 IPR001356 GO:0003677
Vivi6g00768 192 SUPERFAMILY Homeodomain-like 70 134 IPR009057 -
Vivi6g00768 192 PANTHER WUSCHEL-RELATED HOMEOBOX 13 10 184 IPR044559 GO:0003700
Vivi6g00768 192 SMART HOX_1 69 137 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00768 Vivi-Chr6 23632694 23633390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00768 15 165 Wox Gene Family AT4G35550 41.104 4.70e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi6g00768 Homeodomain 5.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00768 - - vvo:131613370 389.037