Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00764 ATGTCTTTTCAGAACAAAGGCTTCTGGATGCCCCGGGATGCCGGCTGCATAGCTGAAGAAAGTGGTGGATATGAAAATTCTTCAAGAGTCGAACCAAAGAGAAGTCACCAGTGGCTTACAGATACAGGTGAACCAGAAATATTTAGCAACAAGAAACAAGCCATTGAAGCTAGTAGTAGTGACATGCCGGTTTCAACAACCAATGTTTCTCACTGGGACACTAGTTCAGGATTTCACTCGGTGACAGGCCAATTTTCTGACCGTCTCTTTGGATCTGATCTTATACGATCAGTCAATTCAGTTGATAACAATATGTCATCAACTGGAAGTGGAAATCTGAACATTGGAGGAAGACAGAGTTTCGGTAATCAGTATGGTAATGATCCATCTGTCAGACTGTCGGTATCACCCACCATGTTAGGCCCTTCACCATGTCTAAATTTTGGTGGTATTAGGAAAGTTAAAGTTAATCAAGTCAGGGATTCTGACCATGGCATGCCAGCTGACAATAATACGTTTTCGATAGATTCTGATTACGATAAGAATGATGGGAATATTACATCGGGTCCATCTTATAGCAACGGAAGCGACAATACCGACAACACCGTTGTTATAGGGATAAGCAAGCCCGGTGACAATCTCCTCTCAATGGGTCACATCTTCAATAAAGGGGATGGGAATTTTATGTTGATGGGTAACAATTATGGAAAGGGAGATGAAAATATTTTATCAACGGGTCGGCCCGTTGAAAGAGGCGACGGAAATTTCATAACAATGAATCAGTCATTTGGGAAGGAAGATGGAAATTTGATCTCTCTGGGCACCTCATATTCCAAGGAGCATGAGAGCTTTCCATCAATGGTTCTAACCTCTGGTAACTCGGGAGAAAATTTCACAACTGTTGCTCCTTCCTATGACAACGGCGCCAATCATTTATCATCAATAGGTCCGGCATATGTTAATGTGGATTCAAACGTTGCTTCGACTAGTCCATCATTTGACAGCAACAACCCTAGCTTTTTACCTGCAAGTCAAAACCTCGGTAACACCAGTACTGCATCTTTTGGAGGTTTTCATGCTGGCCCTGAGCTGAACCCCTCTGGCGGAGTCTTCAGTGGATTTGATCCTTTGATGGGCAACCAAAACTCGGCTCAAGGTGCAGATATCCAGAGGGGTCAGATTGAATCAAACCCTGATCCACTTGTAAATAACACTTCAAAATCTAAAAATAATACCATTGTTAAGATCAAAGAACCAAAGACGGCCAAGAAGGCTTCTAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACTGGTATCTTTGACGGCATTTCGGTGAAATATTGTACATGGTCAAGGGAGAGAAATCTTCAAGGAATCATAAAAGGAACGGGGTACATGTGTTCATGTGACGACTGTAAGGGGCAAAAGGCTCTTAATGCTTATGAGTTCGAGCGTCATGCTGGAGCCAAGTCAAAACACCCTAACAATCACATATTCTTTGAGAATGGAAAATCCATCTATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAAGAGATGCTTTTTGACGCTATTCAAACCGTGACAGGTTCCACCATCAACCAAAAGAACTTTCGCTTTTGGAAAGCGTCATACCAAGCTGCTACCCGTGAGCTTCAGCGCATCTATGGAAGGGATGACGCGGTCATACCATCGTAA 1704 0.4278 MSFQNKGFWMPRDAGCIAEESGGYENSSRVEPKRSHQWLTDTGEPEIFSNKKQAIEASSSDMPVSTTNVSHWDTSSGFHSVTGQFSDRLFGSDLIRSVNSVDNNMSSTGSGNLNIGGRQSFGNQYGNDPSVRLSVSPTMLGPSPCLNFGGIRKVKVNQVRDSDHGMPADNNTFSIDSDYDKNDGNITSGPSYSNGSDNTDNTVVIGISKPGDNLLSMGHIFNKGDGNFMLMGNNYGKGDENILSTGRPVERGDGNFITMNQSFGKEDGNLISLGTSYSKEHESFPSMVLTSGNSGENFTTVAPSYDNGANHLSSIGPAYVNVDSNVASTSPSFDSNNPSFLPASQNLGNTSTASFGGFHAGPELNPSGGVFSGFDPLMGNQNSAQGADIQRGQIESNPDPLVNNTSKSKNNTIVKIKEPKTAKKASNNFPSNVKSLLSTGIFDGISVKYCTWSRERNLQGIIKGTGYMCSCDDCKGQKALNAYEFERHAGAKSKHPNNHIFFENGKSIYAVVQELKNTPQEMLFDAIQTVTGSTINQKNFRFWKASYQAATRELQRIYGRDDAVIPS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00764 567 MobiDBLite consensus disorder prediction 164 197 - -
Vivi6g00764 567 Pfam Tify domain binding domain 460 515 IPR032308 -
Vivi6g00764 567 PANTHER AUTOIMMUNE REGULATOR 8 514 - -
Vivi6g00764 567 MobiDBLite consensus disorder prediction 161 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00764 Vivi-Chr6 23555331 23559231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00764 420 548 PHD Transcription Factor Family AT3G53680 53.846 2.69e-38 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00764 - - gmx:100782217 780.785