Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00756 ATGGCTTCCAACAACAACCACCTTAAAATCCACGAACACCTTAAAGTTGTTCCTCCATTATCATCAACCCAAACAACAACAACAACAATTCCTCTCACATTTCTAGACTTATTGTGGCTAAGGTTTCACCCAGTAGAGAGACTTTTCTTCTACACCCTCCCTATTTCACAATCACACCCCTCTTTCTTCTTTCAAAAACTTGTTCCAATTCTCAAATCTTCACTTTCTTTAACCCTCCAACATTTTCTCCCTCTAGCTGGTAAAATCATTTGGCCTTTAGATTCTTCAAAACCATTCATCCAATTCAATCCCAATGATGATAATAATGGAGTCTCCTTACTCATTGCAGAATCTGATTCCGATTTCAATCATCTCATTCAAAACTCACCCAAAGAAACTTCTTTGTCTCGTTCTTTTATACCGGTTTTGGAATCAACCGATGTCTTTTCTTCTATAGTTTCCATTCAAATAACCCTTTTTCCGAAAAATGGTTTTTCCATTGGAATAAGCACACACCATGCTGTTCTAGATGGAAAATCTTCAACCATGTTCATTAAAGCTTGGGCTTATCTATGCAAAAAAATCACCGAAAACGAAAAATCGCCGACTTTGTTACCAGAGTTAGAGCCTTTACTCGATAGAGAAAGCATCAAAGACCGAGATGGACTTAGTGATATTTTCGCAAACATCTTGACTAAGATGTTTCCAAATGAAAAAGGAAACGAAAGAAGCTTGAAGATTCTCCCTTTTGAACCAAAACTCGAAGACTATGTTCGAGCTACGTTCGAGCTCAAGCGCGAAGATTTGAATAAGATAAAGGAATCCGCGTTATCCAAATGGGAGATATTCGATACAAATGAATCAAAGCCAAAGAGCATATCATCTTTTGTTCTGACTTGTGCTTATTCATTAGTTTGTGTTGCAAAAGCGATTCATCAAATTCAAAATGAGAAAGAGAAATTTGGTTTTTCGTTTATAGTAGATTGTAGAGCAAGGTTAGAACCACCAATAGCAAGTAACTATTTTGGTAATTGTGTTTGGGCACATTTGGTGGATACACAACCATTGGATTTCATAGATGAAGATGGAGTGTTTTTGGTTGCGAAATGTATTCATGAGAAAATAAAGATGATAAATGAAAATGATGTTCTTGAAGGAGCTAAAGATATGATTGGTAAAATTACAAGTTTGATGAAGGAAGGATATGAAATTATTGGAATGGCGGGGTCAAATAGATTTGAAGTTTATGAAAATGATTTTGGTTGGGGAAGGCCGGAAAAAGTGGAGATAGTGTCGATTGATAGAAATTTGACAATTGGTTTGGCAGAGAGCAAAGATGGAAGAGGTGGGATTGAAATTGGACTTGTTCTTAATAAACATGTTATGGAAGTATTTAGTACTCTGTTTTTTGAAGGATTAAGTTTGTGTTAA 1431 0.3592 MASNNNHLKIHEHLKVVPPLSSTQTTTTTIPLTFLDLLWLRFHPVERLFFYTLPISQSHPSFFFQKLVPILKSSLSLTLQHFLPLAGKIIWPLDSSKPFIQFNPNDDNNGVSLLIAESDSDFNHLIQNSPKETSLSRSFIPVLESTDVFSSIVSIQITLFPKNGFSIGISTHHAVLDGKSSTMFIKAWAYLCKKITENEKSPTLLPELEPLLDRESIKDRDGLSDIFANILTKMFPNEKGNERSLKILPFEPKLEDYVRATFELKREDLNKIKESALSKWEIFDTNESKPKSISSFVLTCAYSLVCVAKAIHQIQNEKEKFGFSFIVDCRARLEPPIASNYFGNCVWAHLVDTQPLDFIDEDGVFLVAKCIHEKIKMINENDVLEGAKDMIGKITSLMKEGYEIIGMAGSNRFEVYENDFGWGRPEKVEIVSIDRNLTIGLAESKDGRGGIEIGLVLNKHVMEVFSTLFFEGLSLC 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00756 476 Gene3D - 254 476 IPR023213 -
Vivi6g00756 476 PANTHER - 8 474 - -
Vivi6g00756 476 Gene3D - 8 242 IPR023213 -
Vivi6g00756 476 Pfam Transferase family 22 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00756 Vivi-Chr6 23275299 23276980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00756 22 471 Monolignol Biosynthesis Gene Families AT5G48930 24.236 5.50e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00756 - - tpra:123889238 709.909