Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00753 ATGGAGTTGAATAGACTTCTTAACTTTGATTTGAAAGATGATTCTCGATGGAAGATTGATCCAAGTGATGAGGCTCTTATCAACATTTACCTAAGGAAGAAGGTTCATAGGCAACCTCTTCCACTTAATAACATTGTTGAATATGATGTGTTTCAAACTGAACCTTGGATGCTTCCAGATAGTAGGAGTTCATTCAGAGAGAGGAAGTATTACTTCTTTGATATAAGAAACCATAGATTTGAAAATATGGATACAAGACCAGTTGGAATTGGTGAATGGAGGATTTTGGAGAAGAACACTGAAATTACTATGCCAACCAATATGTTCATTGGGAGAAAGAACACCCTTGAATTCTGGAAGATTGAGGCAGATGAACCAGTGAAAACTGAATTGGTAATGGATGAACTTCGCATCAGTCCAACAATTCAACCATCCAAGGTTTCATCTTTAGGTGTTTATCGGATTTTTAAGACAACTTTACCAACTATAATTGATCTCACAATAGAGGAAGAAAGTTTATCTCTCCCGCCGTCAGCATGA 540 0.3685 MELNRLLNFDLKDDSRWKIDPSDEALINIYLRKKVHRQPLPLNNIVEYDVFQTEPWMLPDSRSSFRERKYYFFDIRNHRFENMDTRPVGIGEWRILEKNTEITMPTNMFIGRKNTLEFWKIEADEPVKTELVMDELRISPTIQPSKVSSLGVYRIFKTTLPTIIDLTIEEESLSLPPSA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00753 179 Gene3D NAC domain 22 160 IPR036093 GO:0003677|GO:0006355
Vivi6g00753 179 SUPERFAMILY NAC domain 20 157 IPR036093 GO:0003677|GO:0006355
Vivi6g00753 179 PANTHER NAC TRANSCRIPTION FACTOR 56 19 157 - -
Vivi6g00753 179 ProSiteProfiles NAC domain profile. 13 158 IPR003441 GO:0003677|GO:0006355
Vivi6g00753 179 Pfam No apical meristem (NAM) protein 18 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00753 Vivi-Chr6 23157300 23158037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00753 17 149 NAC Transcription Factor Family AT3G04070 32.374 2.93e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi6g00753 NAM 4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00753 - - vvo:131614574 275.018