Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00729 ATGTTACTCTTTAGAAGTATTCAAGATTACATGTTCGATGAAAGTGTTTGCCTCCTACTTCGGGCCAAGTGGTTCAAGCCTTTAGCTGTTGAAGAGCGTCCAGTTGTTGAAGAAGATATCTATGAGATAGAAGACTATTATTATCAGTATGAAGAAGCTGATGATGATCTAGATGACAATGAGGATTACTATGGTGCTTCAGCAAATGTCCGGCTTGGCAACCGTAGATGGGGAGACAACGATTTTGTAAGGGCTGGGCGTCAAGAAGCTCGGCCGGTCCATCGACCAAGCTTCCAGGATTCAGGAGCAAGTTCATCGCGTGAGCCAAAGAAGAAAGAACAAGAGTCTCCAAAAGTTATGACAGGAAGACGGGCAATGAGGGCACAGAAAAGGGAAGCTGCTAATAAGGCAGCTGAAGTGAAGCACCAGAAGCATTTGGATAGGTTGGGTAGGAACTAG 459 0.451 MLLFRSIQDYMFDESVCLLLRAKWFKPLAVEERPVVEEDIYEIEDYYYQYEEADDDLDDNEDYYGASANVRLGNRRWGDNDFVRAGRQEARPVHRPSFQDSGASSSREPKKKEQESPKVMTGRRAMRAQKREAANKAAEVKHQKHLDRLGRN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00729 152 MobiDBLite consensus disorder prediction 83 152 - -
Vivi6g00729 152 Coils Coil 123 143 - -
Vivi6g00729 152 MobiDBLite consensus disorder prediction 105 152 - -
Vivi6g00729 152 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00729 Vivi-Chr6 22547177 22552343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00729 6 151 C3H Transcription Factor Family AT5G19430 49.102 2.62e-34 119