Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00716 ATGAAGACTCTTCTTCATCACATTCACATAACACTCTTCACAACACTTCTCATCTCATCACTCTCCAATCTCAAAACTTGCTCCTCAAACAACAACAACAATAACATAAACATTCAACTAAACGACGACATCCTCGGCCTAATGGTCTTCAAATCCGATCTCAACGACCCTTCATCTTCCCTCTCATCATGGAATGAAGATGACATCAATCCATGTTCATGGCAATACATAAAATGCAATCAACAAGGAAGAGTCTCCCAACTCTCACTATCTGGTTTAGCCTTATCAGGTAAAATAGGAAGAGGCCTTGAAAAATTGCAGCACTTGCAAGTGCTGCAGCTTTCTCACAACAATTTGAGTGGAGCCATTAGTCCTTCGCTAACACTCTCGAACACGCTTCAAAGCTTAAACCTTAGTCATAACTCGATCTCGGGTCAATTACCAGACTCTTTCATCGATATGAGCTCGATGAGGTTCCTTGATCTCTCGTATAATTCGTTCGCAGGACAGGTGTTTGATGGTTTTTTCGAGAATTGTTCTTTGCTTAGACGCGTTTCTTTCGCTATGAACTTGTTTGAAGGACAGATTCCTAGTACAATATCTAAGTGTTCTTTGGTGAATAATGTAGATTTTTCGAATAATCACTTTAGTGGAAATGTTGATTTTTCGAGAATTTGGTCATTGACTAGGCTTAGGAATTTGGATCTGTCAAACAATGATTTATCTGGAAACTTGGTTGATGGTGTTTCAAATTTGCATAACTTGAAAGAGTTGTTGCTGCAAAATAATCACTTTTCAGGTGAATTACCAAAGGATATTGGATTATGTATTCATTTGGATAGAATTGATTTTGGTAATAATCAGTTGAGTGGTGAGTTACCTGAATCACTTGGGAGATTAAGCTATTTGAGATATTTTAGGGTTTCAGATAATCACTTATTAGGTGAATTTCCTCAATGGATTGGTAACTTGATTAGTTTGGAGCATTTGGACTTATCTAATAATCAATTCTATGGAAGCATTCCTTTGTCATTGGTTTCATGCATGAAGTTGTCCAAGATTTTTCTTAGAGGGAATGGTTTCAATGGTACTATACCTGAGGGCTTGTTTGGATTAGGGTTAGAGGAAATCGATTTTTCGCGTAATGGACTAATCGGCTCGGTTCCGGCTGGATCGAACAGGTTGTTAGAAACTCTTACAATGTTGGATCTTTCGGTTAATCAATTAAAAGGGAATGTTCCTGCAGAAATCGGTCTGCTTTCGAAGCTGAGATACTTGAATTTTTCTTGGAATGATCTTGATTCTGCGATTCCACCTGAATTTGGTTTACTTCAGAATCTAGAAGTTTTGGATCTGCGTAATTGCGCGTTGTTTGGTTTGATTCCGGAGGATATATGTGATTCGGGAAACTTGGATGTTCTTCAACTTGATGGAAATTCTTTGAAGGGGCCTATTCCAGAAGATATTGGGAATTGTTCATCTCTTTACTTGTTGAGTTTATCATTCAACAATTTGACAGGTCCAATCCCGAAGTCGATGTCAAATCTAAACAAGCTCAAAATCCTCAACTTGGAATTCAATGAACTTAACGGAGAGCTGCCGATGGAGCTCGGAAAGCTTCAAAATCTTCTTGCTGTGAATGTATCACACAACAGCCTCACCGGAAGGCTTCCAGTCGGTAGCATATTTCAAAACTTAGACAAAAGTTCTTTGGAAGGAAACTACGGTCTTTGCTCGCCCTTGTTGAAAGGTCCATGCATAATGAATGTATCAAAGCCTCTAGTTCTTGATCCACATGGCTTTGACAACCAAATGAATCCTCGAACACCGAGAAACGAATCGTCTGAGTCAAGCGGTTCGATTCATCACCACAGGTTTCTTAGTGTTTCGGCGATTATAGCAATTGCAGCTTCTTTTGTGATTGTATTAGGAGTGATTGCTATTAGTCTACTTAACGCTTCGGTAAGGAGAAAGCTAGCGTTTGTGGAGAATAGTTTGGAAAGCATGTGTTCGAGTTCTTCAAAGTCGGGAGCACCGGCCACAGGTAAACTCATTCTTTTTGATTCACAATCCTCACAAGATTGGATCAGTAATCCGGAAAACTTGCTCAGCAAGGCATCTGAGATTGGCGAAGGAGTTTTCGGAACGGTTTATAAAATTCCGTTAGGATCGCAGCAAGGAAGAAACGTTGCAATCAAGAGGCTCGTCACGTCAAACATAATCCAATTTCCAGAAGACTTCGACCGTGAAGTTCGAATTCTAGGCAAAGCCCGACACCCGAATTTGATAGCATTGAAAGGATACTACTGGACTCCTCAACTTCAGCTTTTAGTATCCGAATTCGCACCGAACGGTAACTTGCAATCCAAGTTACACGAAAAGCTTCCTTCAAGTCCTTCACTTTCTTGGCCTAACAGATTCAAGATTTTACTCGGAACAGCAAAGGGACTCTCACATTTGCACCATTCATTCCGACCACCAATCATTCACTACAACATAAAACCGAGCAACATCTTACTCGACGAAAACTTCAACGCGAAGATATCAGATTTCGGGTTAGCCAGGCTTTTAACAAAGCTCGACAAGCACGTGATGAGCAACAGGTTTCAAAGTGCATTAGGCTACGTCGCACCCGAGTTAGCCTGTCAGAGCTTAAGGGTCAATGAGAAATGCGACGTATATGGTTTCGGCGTGATGATTCTCGAGTTAGTGACAGGTAGGAGGCCGGTGGAGTATGGCGAAGATAATGTGTTGATATTGAATGATCATGTGAGGGTTTTGCTTGAACATGGTAATGTTTTGGAGTGTGTGGATCCAAGTTTGATGAATGAGTATCCTGAGGATGAGGTTTTGCCTGTTTTGAAGCTGGCAATGGTGTGTACGTCTCAAATACCGTCTAGCCGGCCTACTATGGCCGAAGTTGTGCAAATATTGCAGGTCATTAAAACTCCGGTTCCTCAAAGGATGGAAGTGTTTTAA 2979 0.4075 MKTLLHHIHITLFTTLLISSLSNLKTCSSNNNNNNINIQLNDDILGLMVFKSDLNDPSSSLSSWNEDDINPCSWQYIKCNQQGRVSQLSLSGLALSGKIGRGLEKLQHLQVLQLSHNNLSGAISPSLTLSNTLQSLNLSHNSISGQLPDSFIDMSSMRFLDLSYNSFAGQVFDGFFENCSLLRRVSFAMNLFEGQIPSTISKCSLVNNVDFSNNHFSGNVDFSRIWSLTRLRNLDLSNNDLSGNLVDGVSNLHNLKELLLQNNHFSGELPKDIGLCIHLDRIDFGNNQLSGELPESLGRLSYLRYFRVSDNHLLGEFPQWIGNLISLEHLDLSNNQFYGSIPLSLVSCMKLSKIFLRGNGFNGTIPEGLFGLGLEEIDFSRNGLIGSVPAGSNRLLETLTMLDLSVNQLKGNVPAEIGLLSKLRYLNFSWNDLDSAIPPEFGLLQNLEVLDLRNCALFGLIPEDICDSGNLDVLQLDGNSLKGPIPEDIGNCSSLYLLSLSFNNLTGPIPKSMSNLNKLKILNLEFNELNGELPMELGKLQNLLAVNVSHNSLTGRLPVGSIFQNLDKSSLEGNYGLCSPLLKGPCIMNVSKPLVLDPHGFDNQMNPRTPRNESSESSGSIHHHRFLSVSAIIAIAASFVIVLGVIAISLLNASVRRKLAFVENSLESMCSSSSKSGAPATGKLILFDSQSSQDWISNPENLLSKASEIGEGVFGTVYKIPLGSQQGRNVAIKRLVTSNIIQFPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVSEFAPNGNLQSKLHEKLPSSPSLSWPNRFKILLGTAKGLSHLHHSFRPPIIHYNIKPSNILLDENFNAKISDFGLARLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLECVDPSLMNEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00716 992 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 348 979 - -
Vivi6g00716 992 Gene3D Phosphorylase Kinase; domain 1 686 782 - -
Vivi6g00716 992 Pfam Protein kinase domain 705 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00716 992 SMART LRR_typ_2 228 251 IPR003591 -
Vivi6g00716 992 SMART LRR_typ_2 420 443 IPR003591 -
Vivi6g00716 992 SMART LRR_typ_2 252 276 IPR003591 -
Vivi6g00716 992 SMART LRR_typ_2 324 348 IPR003591 -
Vivi6g00716 992 SMART LRR_typ_2 444 468 IPR003591 -
Vivi6g00716 992 SMART LRR_typ_2 516 540 IPR003591 -
Vivi6g00716 992 SMART LRR_typ_2 106 131 IPR003591 -
Vivi6g00716 992 SUPERFAMILY L domain-like 301 571 - -
Vivi6g00716 992 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 697 781 - -
Vivi6g00716 992 FunFam Leucine-rich repeat receptor-like protein kinase 40 198 - -
Vivi6g00716 992 Gene3D Transferase(Phosphotransferase) domain 1 783 989 - -
Vivi6g00716 992 Pfam Leucine Rich Repeat 326 347 IPR001611 GO:0005515
Vivi6g00716 992 Pfam Leucine Rich Repeat 446 466 IPR001611 GO:0005515
Vivi6g00716 992 ProSitePatterns Protein kinases ATP-binding region signature. 709 733 IPR017441 GO:0005524
Vivi6g00716 992 MobiDBLite consensus disorder prediction 599 619 - -
Vivi6g00716 992 Gene3D Ribonuclease Inhibitor 39 205 IPR032675 -
Vivi6g00716 992 SUPERFAMILY Protein kinase-like (PK-like) 695 982 IPR011009 -
Vivi6g00716 992 CDD STKc_IRAK 709 979 - -
Vivi6g00716 992 ProSiteProfiles Protein kinase domain profile. 703 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00716 992 Gene3D Ribonuclease Inhibitor 349 592 IPR032675 -
Vivi6g00716 992 Gene3D Ribonuclease Inhibitor 206 275 IPR032675 -
Vivi6g00716 992 Gene3D Ribonuclease Inhibitor 276 348 IPR032675 -
Vivi6g00716 992 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 782 987 - -
Vivi6g00716 992 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 316 590 - -
Vivi6g00716 992 SUPERFAMILY L domain-like 56 386 - -
Vivi6g00716 992 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Vivi6g00716 992 FunFam Inactive leucine-rich repeat receptor-like protein kinase 222 315 - -
Vivi6g00716 992 MobiDBLite consensus disorder prediction 605 619 - -
Vivi6g00716 992 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00716 Vivi-Chr6 22169773 22173653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00716 8 989 Receptor kinase-like Gene Family AT3G28040 61.062 0.0 1174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Vivi6g00716 Pkinase 7.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00716 - - gmx:100795810 1397.88