Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00709 ATGACTCAGGCTGTGCAAGCGTTGAGTCGTTACGGAACGGATTTTGTTGCGGAAGGGAGGGGTTCGGGTTCAGATGCGGAGTGTTTAGGTGGTTTTGAATGTTTTCTGAACATTGTGAGGGCTTTGGGGATGGGATCTTGTATATCGGAGGTTGGTGCTGGTGGTTCGCCGCCTCTGCTAACTTATTCGCAGGAATTGAATGTTGATGGGAAGAGGAAGAGGATAAGGGGTTCTTCTACCATGGATTATAAGGTGCCTGGGAGGATGTTCTTGAATGGGTCAAGTGATGTTGCTTCTATGTATTGTAAGCAAGGAAGGAAAGGAGTCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCGAAGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAAAAAAGTTAGGGATTCTTTCCCTTTAAAGCTTGGTGCACAATGGGATTTGCATCTTAAGAATGAAGATGGATTCAGTAATCAAAATGGTGCTGCCACAAGTTATAATTCTGAAGAGCAAATTAGACAGGTTGGCGAGCACTTTGATCATGAGCTCGATGGATCAAATGCTATCTTGGCATTAAGAGAATCCTTTTTGAAGGCTAGCAAGATTATGGACAAAGAACTGAAACTGCACCGTGATATTGATTGCTTTTGCAGCGGGACTACTGCAGTCACCTTGATCAAGCAGGGGCTGAATCTTGTTATTGCAAATGTGGGGGATTCAAGAGCTGTATTGGGAACCCGAGATCATGCCGATTCTCTTATTGCCGTTCAGTTGACCATTGACCTTAAGCCTAATCTTCCAAAGGAAGAAGAGAGGATTAGGCATCGTAAAGGAAGGGTGTTTTCTCTTAAGAATGAACCTGATGTGTCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTGGCTATGGCACGGGCTTTTGGAGATTTTTGCCTAAAGGATGTTGGGTTGATTTCTGTTCCAGATGTCTCATATCACCGCCTTACAGAGAAGGATGAATTTGTTGTCTTAGCAACAGACGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGAGATTGTGGCATCTGCACCGCAATCTACCGCTGCTCGAATATTGGTTGAGTCAGCTGTTCATGCTTGGAGGACAAAATTCCCTTTCTGTAAGGTTGATGATTGTGCTGCAGTGTGCCTCTTCCTCAATTCAGATTCAGAGTCGAAGGCCGATGATAATACCACAGACAAGTCGATGCCAGATGCAACAATGGACCCAGTTGATCAATCATCTCTACCTAGCGAGAATGGAATTGGAGTGGAAGCTGAAAAACCGCAGTGA 1356 0.4447 MTQAVQALSRYGTDFVAEGRGSGSDAECLGGFECFLNIVRALGMGSCISEVGAGGSPPLLTYSQELNVDGKRKRIRGSSTMDYKVPGRMFLNGSSDVASMYCKQGRKGVNQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLGAQWDLHLKNEDGFSNQNGAATSYNSEEQIRQVGEHFDHELDGSNAILALRESFLKASKIMDKELKLHRDIDCFCSGTTAVTLIKQGLNLVIANVGDSRAVLGTRDHADSLIAVQLTIDLKPNLPKEEERIRHRKGRVFSLKNEPDVSRVWLPNSDFPGLAMARAFGDFCLKDVGLISVPDVSYHRLTEKDEFVVLATDGIWDVLSNEEVVEIVASAPQSTAARILVESAVHAWRTKFPFCKVDDCAAVCLFLNSDSESKADDNTTDKSMPDATMDPVDQSSLPSENGIGVEAEKPQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00709 451 CDD PP2Cc 97 407 IPR001932 -
Vivi6g00709 451 MobiDBLite consensus disorder prediction 424 441 - -
Vivi6g00709 451 MobiDBLite consensus disorder prediction 411 451 - -
Vivi6g00709 451 Pfam Protein phosphatase 2C 104 374 IPR001932 -
Vivi6g00709 451 PANTHER PROTEIN PHOSPHATASE 86 405 IPR015655 GO:0004722|GO:0006470
Vivi6g00709 451 ProSiteProfiles PPM-type phosphatase domain profile. 97 407 IPR001932 -
Vivi6g00709 451 SUPERFAMILY PP2C-like 96 408 IPR036457 -
Vivi6g00709 451 Gene3D - 93 416 IPR036457 -
Vivi6g00709 451 SMART PP2C_4 91 405 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00709 Vivi-Chr6 21844355 21848545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00709 44 409 PP2C-type Phosphatase Gene Family AT3G02750 53.256 2.42e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00709 - - gmx:100810538 709.523