Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00703 ATGACCATGGTTCCTTCTCAAACCAACAAAACTAATGGTGATTATGTTTTCTACAACAATACAACAAGTGATATGAACCACTTTCAATTTCTTGAAGATTACAACAACTACAATAATAATTGTCTAAGATCCGAATTTTTGTTCAAGCACATGGCTGAAGAAGTGGAACCGTTTTCAAGACATAACGAACCCGAACCCGAACCTGAACCCGAGCTCGAAACTATTTCTACCTCAAAGGAAAGTGAAGAACAAGAAAGAAAACCAAACAACAACAATTGGCTTCAACTAAGCATAGGTAACACCGTTCTAACAACAACTACAACAAAACACGATGCTGATCACAGTCAAGCTCCAACAAATTTGTTGGAGCTTGAACTGTTACCAACAAATTGGACTTCATCACGGCCCGATTTAGAGCAACCTTCCATCAGAGGTTGCTCTACTTTCAATTCTTCTATGTTTTTCGAGCAAACAACTCCCTCTTCTTCTTCATCTGTGTCCGTGTCCATGTCCATGCCAGCAGGTCCAAGTTATAGTCATCAACAACATCTAGTTCCACATAACTGGGCATTTGGTCCATTACTACCACATTCTATGGCAATTATGGCTTCTTCTACATCTTATATTCCATCTTCTTCTTCTTCTTTTTCTTCGTCGCAATCTTGTTCTTCATTAAGACCTTCTTTAGGACCTAATTATTATCCTCAATATCACCATGCATCACCTTTTCATTTTCCTTCATCTTCTTCTTCTGGATTTGATCAATTTGATATTGCTGGACCTAGCTCATCATCTCATCTCACTTTTCGCGTCGTCGATCCTCCTCGTCGACCTCATTCGGGAATATGGTTCATGCTACAAGCCTCACAAAATCAAGTGAAAGAACCATTTTTGCCTCAAATACCTAAGAACTATCTTAGAATCAAAGATGGAAGAATGACAGTTAGGTTGCTCATGAAGTATCTGGTAAACAAACTCAAATTGGAGAGCGAATCAGAGATAGAGATAACATGCAAAGGACAACAACTTTTACCTTTCTTGACGTTGCAACATGTGAGGGATAATATTTGGACACCAAGGGACACAACAACAACAACAACAACAAGACCTTTGCTTTCAGATTCCTCAACAACTGATCATGTAATGGTGCTTCATTACTCTAGAAGCACTTCTTGA 1176 0.3886 MTMVPSQTNKTNGDYVFYNNTTSDMNHFQFLEDYNNYNNNCLRSEFLFKHMAEEVEPFSRHNEPEPEPEPELETISTSKESEEQERKPNNNNWLQLSIGNTVLTTTTTKHDADHSQAPTNLLELELLPTNWTSSRPDLEQPSIRGCSTFNSSMFFEQTTPSSSSSVSVSMSMPAGPSYSHQQHLVPHNWAFGPLLPHSMAIMASSTSYIPSSSSSFSSSQSCSSLRPSLGPNYYPQYHHASPFHFPSSSSSGFDQFDIAGPSSSSHLTFRVVDPPRRPHSGIWFMLQASQNQVKEPFLPQIPKNYLRIKDGRMTVRLLMKYLVNKLKLESESEIEITCKGQQLLPFLTLQHVRDNIWTPRDTTTTTTTRPLLSDSSTTDHVMVLHYSRSTS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00703 391 PANTHER RING FINGER PROTEIN 1 389 IPR044171 GO:0007275
Vivi6g00703 391 MobiDBLite consensus disorder prediction 57 94 - -
Vivi6g00703 391 MobiDBLite consensus disorder prediction 57 87 - -
Vivi6g00703 391 Gene3D - 276 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00703 Vivi-Chr6 21729370 21741307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00703 295 387 C3H Transcription Factor Family AT3G23060 37.634 1.04e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00703 - - lja:Lj1g3v3138970.1 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00703 6 21729370 21741307 Vivi6g00703 6 21729370 21741307 ECH