Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00691 ATGGCTTTGGACCAACCTTCGTTACCTTCGAATCCCAATACCAATTCCGGTGACGGTAACGGCAACGGTAACGGGACGCCACCGTCGTCCACCGTGAATGGCGGCGAGGATGGGAAGCCTACGGCGAGGCTACCGCGGTGGACGCGGCAGGAGATTCTGGTGCTGATACAGGGGAAGAGTGACGCGGAGAGCCGGTTCAAACCGGGGAGAAACGGTTCGGGGTTTGGTTCGAGTGAGCCGAAATGGGCGTTGGTTTCGTCGTACTGTAAGAAGCACGGTGTGAACCGGGGGCCGATTCAGTGTCGGAAGCGGTGGAGCAATCTCGCCGGAGATTATAAGAAGATTAAGGAGTGGGAGACTCAAGTGAGAGATGAAACGGAGTCGTTTTGGTTGATGAGGAATGATTTGAGGAGGGAGAGGAAATTGCCGGGGTATTTTGATCGGGAGGTTTATGATATTCTTGATTCGCCGTCTGTGGCTGTGGCGGCGGCTGCTGCCGCGGCGGCGACGGTGCTTCCTGTGGCTGTGTCGGTTTCGGAGGCGGTGGGGGATGAGGAGGTTCATATTTATGATAGTAATAGGAAAGTGAGTGGTGAAGATGGGTTGTTCTCGGATTTTGAGAAGGATGAGATTTTGGTTTCTTCCAAAGATGTTCATGTTCCTTCACCTGTTCCTATCTCAGAGAAGCAGTTTCTACCGCTCCTTAGTCGCTGCCAAGGAGAAGGCAATGCTCAAGGTACCAACAATGAGAAACAACCAGCCTCAAATCCCGAAATGGGTTCTACATCTCAAGGGGAACGGAAGAGGAAACGGTTTCCAACCGATGAAGAAGATGAATCTCTGCAAAGTCAGTTAATCGACGTGTTAGAGAAAAACGGCAAGATGCTGAGCGAACAACTAGAGGCTCAGAACATGAACTTCCAACTGGATCGCCAGCACCAGAACGACACTGCGAGTAACATAGTTGCCGTGCTTGATAAGCTCGCAAATGCTCTTGGAAGAATTGCTGATAAATTGTAG 1020 0.5137 MALDQPSLPSNPNTNSGDGNGNGNGTPPSSTVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKPGRNGSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWETQVRDETESFWLMRNDLRRERKLPGYFDREVYDILDSPSVAVAAAAAAAATVLPVAVSVSEAVGDEEVHIYDSNRKVSGEDGLFSDFEKDEILVSSKDVHVPSPVPISEKQFLPLLSRCQGEGNAQGTNNEKQPASNPEMGSTSQGERKRKRFPTDEEDESLQSQLIDVLEKNGKMLSEQLEAQNMNFQLDRQHQNDTASNIVAVLDKLANALGRIADKL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00691 339 MobiDBLite consensus disorder prediction 1 36 - -
Vivi6g00691 339 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 339 - -
Vivi6g00691 339 MobiDBLite consensus disorder prediction 239 282 - -
Vivi6g00691 339 Gene3D - 47 114 - -
Vivi6g00691 339 CDD GT1 45 116 - -
Vivi6g00691 339 MobiDBLite consensus disorder prediction 263 278 - -
Vivi6g00691 339 ProSiteProfiles Myb-like domain profile. 39 109 IPR001005 -
Vivi6g00691 339 MobiDBLite consensus disorder prediction 240 262 - -
Vivi6g00691 339 MobiDBLite consensus disorder prediction 1 78 - -
Vivi6g00691 339 Pfam Myb/SANT-like DNA-binding domain 46 132 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00691 Vivi-Chr6 21015106 21018472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00691 10 117 Trihelix Transcription Factor Family AT1G76880 26.852 4.41e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi6g00691 Myb_DNA-bind_4 3.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00691 - - vvo:131608963 636.721