Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00690 ATGGCTTTGGACCAACCTTCGTTACCTTCGAATCCCAATACCAATTCCGGTGACGGTAACGGCAACGGTAACGGGACGCCACCGTCGTCCACCGTGAATGGCGGCGAGGATGGGAAGCCTACGGCGAGGCTACCGCGGTGGACGCGGCAGGAGATTCTGGTGCTGATACAGGGGAAGAGTGACGCGGAGAGCCGGTTCAAACCGGGGAGAAACGGTTCGGGGTTTGGTTCGAGTGAGCCGAAATGGGCGTTGGTTTCGTCGTACTGTAAGAAGCACGGTGTGAACCGGGGGCCGATTCAGTGTCGGAAGCGGTGGAGCAATCTCGCCGGAGATTATAAGAAGATTAAGGAGTGGGAGACTCAAGTGAGAGATGAAACGGAGTCGTTTTGGTTGATGAGGAATGATTTGAGGAGGGAGAGGAAATTGCCGGGGTATTTTGATCGGGAGGTTTATGATATTCTTGATTCGCCGTCTGTGGCTGTGGCGGCGGCTGCTGCCGCGGCGGCGACGGTGCTTCCTGTGGCTGTGTCGGTTTCGGAGGCGGTGGGGGATGAGGAGGTTCATATTTATGATAGTAATAGGAAAGTGAGTGGTGAAGATGGGTTGTTCTCGGATTTTGAGAAGGATGAGATTTTGGTTTCTTCCAAAGATGTTCATGTTCCTTCACCTGTTCCTATCTCAGGTACCAACAATGAGAAACAACCAGCCTCAAATCCCGAAATGGGTTCTACATCTCAAGGGGAACGGAAGAGGAAACGGTTTCCAACCGATGAAGAAGATGAATCTCTGCAAAGTCAGTTAATCGACGTGTTAGAGAAAAACGGCAAGATGCTGAGCGAACAACTAGAGGCTCAGAACATGAACTTCCAACTGGATCGCCAGCACCAGAACGACACTGCGAGTAACATAGTTGCCGTGCTTGATAAGCTCGCAAATGCTCTTGGAAGAATTGCTGATAAATTGTAG 966 0.5135 MALDQPSLPSNPNTNSGDGNGNGNGTPPSSTVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKPGRNGSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWETQVRDETESFWLMRNDLRRERKLPGYFDREVYDILDSPSVAVAAAAAAAATVLPVAVSVSEAVGDEEVHIYDSNRKVSGEDGLFSDFEKDEILVSSKDVHVPSPVPISGTNNEKQPASNPEMGSTSQGERKRKRFPTDEEDESLQSQLIDVLEKNGKMLSEQLEAQNMNFQLDRQHQNDTASNIVAVLDKLANALGRIADKL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00690 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 321 - -
Vivi6g00690 321 MobiDBLite consensus disorder prediction 1 36 - -
Vivi6g00690 321 Pfam Myb/SANT-like DNA-binding domain 46 132 IPR044822 -
Vivi6g00690 321 Gene3D - 47 114 - -
Vivi6g00690 321 MobiDBLite consensus disorder prediction 224 244 - -
Vivi6g00690 321 CDD GT1 45 116 - -
Vivi6g00690 321 MobiDBLite consensus disorder prediction 217 264 - -
Vivi6g00690 321 MobiDBLite consensus disorder prediction 245 260 - -
Vivi6g00690 321 ProSiteProfiles Myb-like domain profile. 39 109 IPR001005 -
Vivi6g00690 321 MobiDBLite consensus disorder prediction 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00690 Vivi-Chr6 21015106 21018475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00690 10 117 Trihelix Transcription Factor Family AT1G76880 26.852 4.34e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi6g00690 Myb_DNA-bind_4 3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00690 - - vvo:131608963 588.956