Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00687 ATGGGATTGATTTGTGGGTGTGACTTTGTTGGTTGTGTTTTGATGTTTAGGAAAAGACAAACCCTTTTTTCTCTTTCAAATAGGTTGTTGGTGTTTCAGCTTCTTGTGCTGTTCTTGTTTTGTTTGCATCATGATAATAGAGTGCAATGTCATGGGAGATTGAGTAAACATGTATCTTATGAGTCTCGATCGGGGTCGGGGTCGGGGTCGGAATACAAGGATGATTCTAAGAAGATTATTGTTAGTGTAGTTTTAGGAGTGATCACTGGATTAATTGGTTCGATTCTGTTTGCGTTTGTGATTCGTTGTGTCGTTCGGTATCTGAATAGAACGCCTATCCTTAAAGGACCGGTGATATTCTCGCCGAAGATTGCCTCGAAGACGCTCCAATTAGCTTTGTCGAAAGAAAACCATTTGCTTGGTTCGAGTGCGAATGGGAAGTACTACAAAACTGTTCTTGAGAATGGTCTCATAATTGCGGTGAAAAAGCTTACACCGTTCGAGAGCAATTCGCAAGAGAGTAGGAGAAAATCGGTGAAGAGGAAGATACAGATGGAGCTAGAGCTTCTTGCAAGCTTGAGACACAGGAATTTGATGAGTTTGAGGGCTTATGTTCGCGGAAACGATGGATTCTCATTGGTTTATGATTATGTGTCGACCGGGAGTCTCGCGGATGTGATGAATAGGGTTAGGGAAAATGAGTTGCAGATTGGTTGGGAAGTTAGGTTGAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAATATCTTCATTACACTTGTGTGCCTCAGATTTTGCATTTCAATTTGAAGCCTACTAATGTGATGTTGGATGCCGAGTTTGAACCTAGATTGGCTGATTATGGTTTGGCTAAACTTCTACCAAACTTAGATAGAGGGAATTCTCTCAACACCCCTCCCGAATGTTTCCTGAATTCCAGGTACACAGAAAAAAGTGACATATTCAGTTTTGGGATGATACTAGGCGTTTTATTAACCGGTAAGGACCCTACGGATCCGTTCTTTGGAGAAGCGGAGAGAGGTGGAAGTTTGGGATGTTGGCTGCGACACTTGAAGCAAGCGGGCGAGGAACGAGAAGCTCTGGATAAGAGTATTTTGGGGGAACAAGGTGAAGAAGATGAGATGCTAATGGCTGTTGGGATTGCTGCTGCATGCTTATCTGATATGCCTGCTGATAGACCTTCAAGCGACGAACTTGTTCACATGCTAACACAGCTTAATAGTTTTTGA 1248 0.4295 MGLICGCDFVGCVLMFRKRQTLFSLSNRLLVFQLLVLFLFCLHHDNRVQCHGRLSKHVSYESRSGSGSGSEYKDDSKKIIVSVVLGVITGLIGSILFAFVIRCVVRYLNRTPILKGPVIFSPKIASKTLQLALSKENHLLGSSANGKYYKTVLENGLIIAVKKLTPFESNSQESRRKSVKRKIQMELELLASLRHRNLMSLRAYVRGNDGFSLVYDYVSTGSLADVMNRVRENELQIGWEVRLRIAVGVVKGLQYLHYTCVPQILHFNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGNSLNTPPECFLNSRYTEKSDIFSFGMILGVLLTGKDPTDPFFGEAERGGSLGCWLRHLKQAGEEREALDKSILGEQGEEDEMLMAVGIAAACLSDMPADRPSSDELVHMLTQLNSF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00687 415 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 218 414 - -
Vivi6g00687 415 SUPERFAMILY Protein kinase-like (PK-like) 137 410 IPR011009 -
Vivi6g00687 415 Pfam Protein kinase domain 136 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00687 415 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 65 411 - -
Vivi6g00687 415 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 126 217 - -
Vivi6g00687 415 Gene3D Transferase(Phosphotransferase) domain 1 218 414 - -
Vivi6g00687 415 Gene3D Phosphorylase Kinase; domain 1 121 217 - -
Vivi6g00687 415 ProSiteProfiles Protein kinase domain profile. 134 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00687 Vivi-Chr6 20983943 20986268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00687 80 412 Receptor kinase-like Gene Family AT2G31880 34.831 3.83e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Vivi6g00687 Pkinase 9.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00687 - - gmx:102664273 627.861