Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00673 ATGGACGCGCGTCGAGGCTCACGCGCCGTCGTAGACCCTAAAATTCGCATGGTCGGTTTCTTCACTCCTCCCGCTCCGGTTCAATTCGAGTTCTCTCCTTCCGCCAATTCTCTCTCTCCGGTCATGATCCCTCCGCCGCTTCATTCATCGGAAAATCTCGAACTCTGTTCTCAACCTTCCGTCGTCACTTCTCCTTCCTGCGATGAAGCTATTGCCGTCTCACGGAGCCTCAATAGCTGCTCCGAAGAGATGTTTCCTGCTTCGATGTCTCTCTCTCCGTCTCCGGTGGCTTCTACAGTAGCTCGCGGTGGATTGGACTCGACGACTGTGAAGAGCGGTGGCGGAATTCCGATGTGTAATTTGACTACGGTTTCTGTGGTCAATGCTGATTCGTTTGCGATTGACGAAAGAGAGAAGCCGATCAAAGGAGGAGGATCTGCAGTGGACGTTAAAGACGAAGCTGTGAATTCAAAACAGAAGAAAGATAAGTCCTCAAAAGCTGAAAGACGTGCTCTTCAAGAAGCTCAGCGAGCGGAAAAGGCTGCTGCAAAAGCTGAAGGAAATACGGCATCTAGAACTGCAACTTCAGCGAGTGTAAAATCAGCTAAAGCTGCAAAGCCCCCACACAAAGCTGTTAATACGTCTGCTGCAGCTTCTGAGAAAAAGGGTGGTGATCGGCCATCAGAGAAGGATAGGAAAAAAGATGTTCCTCACCCACGCCTGCAATATGATGATAAGAGCAGAGTAGAGAAAGCTAAACGCCGTGCTGTGGTAAACCAAACTGAATCCAGGAACAGAGTTGAACTGTTTAGACATTTGCCACAGTATGAACATGGGAGTCAGCTTCCTGATCTTGAGGCAAAGTTTTTCCAGCTTGGTCCTGTGCATCCATCAGTTTATAAGGTGGGTTTGCAGTATCTTTCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTCCAGGATGCCATCAAAGACTACACAGTTCCACTTGGGAAGACTCTAGTGAGAGACTTGACAGCAAAAATTAGTAGCTATGTTTCATTTCTTATTGAGTGTCGACCTCTTTCAGTCAGTATGGGAAATGCAATTAGATTTCTCAAAAGTCGAATTTCACAGCTACCTCGAACACAGTCTGAGTCAGAATCAAAAACTTCTCTTCAATCAGATATTGAGCGTTTTATATATGAGAAGATTATACTTGCTGACAAGATGATAGTAGAGCATGCTGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGTTCATCGTCAGCAGTTGAAATGATACTGTTACATGCACATAAATTAGGGAAACAGTTTCGAGTTGTAGTAGTAGACTCTCGTCCAAGTCATAGAGGGAAACTTCTGCTTCGTAGACTAGTGGAGGAAGGTCTTAGTTGTACATACACTCATATCAATGCTGTTTCCTACATAATGCATGAGGTTACTCGAGTTTTTCTAGGCGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCAGGAGTTGGAACTGCATGTGTTGCAATGATCGCTCATGAATTCCATGTCCCTGTTATAGTTTGTTGTGAAGCTTTTAAATTTCATGAAAGGGTACAACTTGACTCAATATGCTCAAATGAACTTGGTGATCCAGATCTCGTTTCAAAGGTTTCGGGTAGACGGGATATTAACCACTTGGATGCTTGGGCCAATACTGAAAATCTGCAACTTCTAAATCTGATCTATGATGCCACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGATCCCCCCAACAAGTGTTCCTGTCGTTGTAAGGGAATATAACAGAGAACATGCGTGGATATAA 1863 0.4402 MDARRGSRAVVDPKIRMVGFFTPPAPVQFEFSPSANSLSPVMIPPPLHSSENLELCSQPSVVTSPSCDEAIAVSRSLNSCSEEMFPASMSLSPSPVASTVARGGLDSTTVKSGGGIPMCNLTTVSVVNADSFAIDEREKPIKGGGSAVDVKDEAVNSKQKKDKSSKAERRALQEAQRAEKAAAKAEGNTASRTATSASVKSAKAAKPPHKAVNTSAAASEKKGGDRPSEKDRKKDVPHPRLQYDDKSRVEKAKRRAVVNQTESRNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPSVYKVGLQYLSGDISGGNARCIAMLQAFQDAIKDYTVPLGKTLVRDLTAKISSYVSFLIECRPLSVSMGNAIRFLKSRISQLPRTQSESESKTSLQSDIERFIYEKIILADKMIVEHAVTKIRDGDVLLTYGSSSAVEMILLHAHKLGKQFRVVVVDSRPSHRGKLLLRRLVEEGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSGVGTACVAMIAHEFHVPVIVCCEAFKFHERVQLDSICSNELGDPDLVSKVSGRRDINHLDAWANTENLQLLNLIYDATPSDYVSMIVTDYGMIPPTSVPVVVREYNREHAWI 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00673 620 MobiDBLite consensus disorder prediction 153 181 - -
Vivi6g00673 620 Coils Coil 168 188 - -
Vivi6g00673 620 MobiDBLite consensus disorder prediction 138 260 - -
Vivi6g00673 620 Gene3D - 407 613 IPR042529 -
Vivi6g00673 620 SUPERFAMILY NagB/RpiA/CoA transferase-like 295 613 IPR037171 -
Vivi6g00673 620 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 33 617 - -
Vivi6g00673 620 MobiDBLite consensus disorder prediction 222 260 - -
Vivi6g00673 620 Pfam Initiation factor 2 subunit family 311 603 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00673 Vivi-Chr6 20511831 20517637 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00673 1 620 Eukaryotic Initiation Factors Gene Family AT5G38640 61.621 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00673 K03680 - gmx:100785938 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00673 6 20511831 20517637 Vivi6g00673 6 20511831 20517637 ECH