Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00652 ATGAACGAGCCACCTGGTTCTCGTGCCGGTGTTGGACTTACTGGACTCACTGTCGCTGAACACTTCCGTGATGCTGAAGGACATGATGTGCTTCTTTTCATCGACAACATTTTCCGCTTTACTCAAGTATGGACAACTTATCCTGGGACCAGAAGTTGGAAGAAGCAAAGAAGGACGACAAGATTTATTCAAGATTACATGTTCGATGAAAGTGTTTGCCTCCTACTTCGGGCCAAGTGGTTCAAGCCTTTAGTTGTTGAAGAGCGTCCAGTTGTTGAAGAAGATATCTATGAGATAGAAGACTATTATTATCAGTATGAAGAAGCTGATGATGATCTAGATGACAATGAGGCTTACTATGGTGCTTCAGCAAATGTCCGGCTTGGCAACCGTAGATGGGGAGACAACAGTTTTGTAAGGGCTGGGCGTCAAGAAGCTCGGCCGGTCCATCAACCAAGCTTCCAGGATTCAGGAGAGGGGAAGAAAGGTGGAGTTACCGAACATAAATGGAGAAACGACGGTGGTCGTTTTCAATGGTATGGTGGTCGAAAAACGTGA 558 0.457 MNEPPGSRAGVGLTGLTVAEHFRDAEGHDVLLFIDNIFRFTQVWTTYPGTRSWKKQRRTTRFIQDYMFDESVCLLLRAKWFKPLVVEERPVVEEDIYEIEDYYYQYEEADDDLDDNEAYYGASANVRLGNRRWGDNSFVRAGRQEARPVHQPSFQDSGEGKKGGVTEHKWRNDGGRFQWYGGRKT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00652 185 Gene3D - 1 68 IPR027417 -
Vivi6g00652 185 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 62 162 - -
Vivi6g00652 185 MobiDBLite consensus disorder prediction 144 185 - -
Vivi6g00652 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 47 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00652 Vivi-Chr6 19817785 19820951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00652 63 151 C3H Transcription Factor Family AT5G12310 56.667 7.47e-21 84.7