Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00639 ATGATTGTTGGTGTGCTTGGAGGAAATGCTGGAGGAGAAGGGATTGGTGCTGATAGAGATGAACCAGGTGTTGATGGTATAGAGATTACTTGGGATATATTCAAGAGGGAATTTCTGAGAAGATATTTTCCTGAAGATGTTAGAGGCAGAAAGGAAGTGGAATTTCTTGAGCTGGTCCAAGGTAATATGACGGTACCAGAGTATGCTGCAAAGTTTGTGGAGCTGGAAAAGTACTATGTTCATTACAAAAATGATGAAGCCAAGGAAAAAACAAGTGGTAATAAACAAGATATTACAATAACTAATATTAATGGGAGACTTTTAGTGGAAGAAATTGAGAGAATGATTCGAGAAGCTAAGAATTTCAAGGCGGAAGACATGAAGTATATGAAGAAGGCTAGAGCAATGAGTGATTTGGACCATTATCTTTATGAAATGAAGAAAGTAATGAAGGATACTAGTGTATCTTCCAAGCTCATTGTTGAATACAAAGTAAAGATCGTTTCTGCAATCACCATGGGAAATGAATTGATTGATGACAATGAGCATCAAGAAACATTTGTGTTTGTGGACTTTCTGAGGGAGATTAAGAGCATCTTTGAATTAGCTATGAAAAATATCAACAAAGGTTAA 633 0.3618 MIVGVLGGNAGGEGIGADRDEPGVDGIEITWDIFKREFLRRYFPEDVRGRKEVEFLELVQGNMTVPEYAAKFVELEKYYVHYKNDEAKEKTSGNKQDITITNINGRLLVEEIERMIREAKNFKAEDMKYMKKARAMSDLDHYLYEMKKVMKDTSVSSKLIVEYKVKIVSAITMGNELIDDNEHQETFVFVDFLREIKSIFELAMKNINKG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00639 210 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 80 135 IPR029047 -
Vivi6g00639 210 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 136 201 IPR029048 -
Vivi6g00639 210 Pfam Hsp70 protein 86 184 IPR013126 GO:0005524|GO:0140662
Vivi6g00639 210 Gene3D - 136 208 IPR029048 -
Vivi6g00639 210 Pfam Retrotransposon gag protein 29 87 IPR005162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00639 Vivi-Chr6 18809759 18829905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00639 84 210 Calmodulin-binding Proteins AT3G12580 40.157 1.33e-20 87.4