Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00609 ATGGACAAACCTTTACACATTTTTTTAAGATCATTGGAAAAGTTTGAAACAAAAAACTGCTCTTGGCTAAGTGCTCATGATGTAACTATATATGGGCCTCTACTTCAAAGTGTTTTAGTAGTACAAGACCTTGAGTCAGTAACTCGTGAGCCACGTAGCTGCACAATCAAATTTTCTGCTTCATGTATGAAAGAATTCACTTATCAAGGATATGGTGGTATATCACAGCCCATTGTTCTGTCAAATCCATCCGCAGCCCGTGACGCTTTTGTTAAGATTATGTTGGATAGGAGTGGGAGTTATGTTCAAGAAACTGGATCATGTGCTTGTCTCCTTCTCAAGTGTTTTAGTCAAGCGAAGCGTATCGAATTTCACGGATCAGAGGTTCTTACACAAGCAAATATGATTGTTCTATCAAGATTTGCAATGTTGAGCCATTTGGATCTAGGCGTTATTACTGGTGAAGTTTTGTTGAGCTTACTTCAAAAGTCTCCTATTCTCAATACTCTTGTTTTAAAGGAAATATCAACATTCGACCAAGAGCTTCTGAATTCTGCTGCTGTGCCCGAGTGTTTGGCATCAAGTCTCCGATTTGTGAAATTTGGAAGTGTCGATGGATCCCAGCCAGAGTTATTTTTGGCTAAATATTTTATGGAAAATGGCGTAGTGCTTGAGAGGATGAGTTTCTGCATTGTCAATGGATGGCTGAGTAATTCTAAGTATATTTGTGCTAAGTGTGTTGTATGTGAAGACATAAAAGTAAGCAACATCATGTTGGATTCAGAGTTTAATGCAAAACTGGGAGATTTTGATTTAATAAGGTTTGTGGATCATGCAAAAGGTGCACAAACAACAGCTTTAGCAGGGACTATTGGATACTTGACTCATGAATTTGCTATCACTGGAAGGGCTAGTAATGGAACTGATGTGCTTAGTTTAGGTGGCTTGTGGAAGAAAACCAGTACATATTAA 972 0.3837 MDKPLHIFLRSLEKFETKNCSWLSAHDVTIYGPLLQSVLVVQDLESVTREPRSCTIKFSASCMKEFTYQGYGGISQPIVLSNPSAARDAFVKIMLDRSGSYVQETGSCACLLLKCFSQAKRIEFHGSEVLTQANMIVLSRFAMLSHLDLGVITGEVLLSLLQKSPILNTLVLKEISTFDQELLNSAAVPECLASSLRFVKFGSVDGSQPELFLAKYFMENGVVLERMSFCIVNGWLSNSKYICAKCVVCEDIKVSNIMLDSEFNAKLGDFDLIRFVDHAKGAQTTALAGTIGYLTHEFAITGRASNGTDVLSLGGLWKKTSTY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00609 323 SUPERFAMILY Protein kinase-like (PK-like) 213 315 IPR011009 -
Vivi6g00609 323 ProSiteProfiles Protein kinase domain profile. 63 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00609 323 Pfam Protein kinase domain 230 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00609 323 Pfam FBD 188 229 IPR006566 -
Vivi6g00609 323 PANTHER - 229 314 - -
Vivi6g00609 323 Gene3D Transferase(Phosphotransferase) domain 1 214 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00609 Vivi-Chr6 18475661 18477560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00609 245 314 Receptor kinase-like Gene Family AT5G10530 62.857 1.21e-21 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi6g00609 Pkinase 1.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00609 - - vvo:131613286 641.343