Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00585 ATGAAAATGATGAAGCCAACAAGAGTTTTTGTAGATTTTATTTGTTTTGCATTTTTCTTGTTGTGGAGTTTTTCATGCTCACATGCTTTGCTTTCTTCTAAAGGTGTGAACTTTGAAGTTCAAGCTTTAATGGATATAAAAGAGACTCTAGTGGATCCACATGGTGTTCTTGATAATTGGGATGGTGATGCAGTTGATCCATGTAGTTGGACTATGGTTACTTGTTCTAGTGAAAATCTTGTCATTGGATTGGGCACTCCGAGTCAGAGTTTATCAGGTACTCTATCTCCAAGCATAGGGAATTTAACCAACCTTCAGATTGTGCTGTTACAGAATAACAACATAACCGGATCAATCCCTTCGGAATTAGGCAAACTTCCTAAGCTGCAGACTCTTGATCTCTCTAATAATTTCTTCCGTGGTGAAATTCCTTCTTCTCTTGGACATTTGAAAAGCCTTCAATACTTGAGGTTTAATAATAACAGTCTTGTTGGTGAATGTCCAGAATCTCTAGCTAACATGACACAACTTTCTTTTCTTGATTTGTCTTACAACAATCTCAGTGGACCTGTACCGAGAATTTTGGCCAAATCATTTAGCATTGTTGGTAATCCTCTTGTTTGTGCTACTGGAAATGAACCAAACTGTCACGGGATTACATTGATGCCAATATCCATGAACCTAAACAATACTAATCAAGATGTTTTACCATCGAGCAAACCGAAAAGTCATAAAATGGCGATAGCCTTCGGCTTGAGTCTTGGATGTCTTTGCATGATAGTTATCGGTTTTGGACTTGTTCTTTGGTGGAGACACAAGCATAATCAACAACCATTCTTTGATGTCAAAGACCGACATCATGAAGAAGTTTACCTTGGAAACTTGAAGAGATTTCCATTCAGAGAACTCCAAATTGCTACTCACAACTTCAGCAACAAAAACTTAGTTGGAAAAGGCGGTTTTGGAAATGTCTACAAAGGAATTCTCTCGGACGGAACCGCTGTAGCTGTCAAGAGGCTTAAAGATGGAAATGCAATTGGAGGAGAGATTCAATTTCAGACTGAAGTTGAAATGATCAGTCTTGCAGTACATAGAAATCTGCTTCGACTTTATGGATTTTGCATGACATCGTCCGAAAGGCTTTTAGTTTATCCTTACATGTGCAATGGAAGTGTTGCGTCTCGTTTGAAGGGTAAACCCGTCTTGGATTGGGGAACAAGGAAGAACATTGCTTTAGGAGCAGCAAGGGGACTACTATACCTTCATGAACAATGTGATCCAAAGATAATTCACAGGGATGTGAAAGCTGCAAACATATTACTCGATAACTATTGTGAAGCTGTAGTTGGCGATTTCGGTTTGGCAAAGCTTTTGGATCATCAAGATTCACATGTCACAACAGCAGTGAGAGGAACTGTAGGACATATTGCGCCGGAATATCTTTCGACAGGACAATCCTCTGAGAAAACTGATGTGTTTGGATTTGGCATTCTTCTCCTTGAGTTAATTACAGGTCAGAGAGCCTTAGAATTTGGAAAAGCAGCTAATCAAAAAGGAGCCATGCTTGATTGGGTGAAGAAAATCCACCAAGAGAAGAAACTCGAACTCCTCGTAGACAAAGATCTAAAAACCAACTACGACAAAATCGAGCTCGAAGAAACGGTTCAAGTAGCACTCTTATGCACTCAATATCTCCCAAGCCATAGACCCAAAATGTCAGAAGTTGTAAGAATGCTTGAAGGTGATGGACTAGCTGAGAGATGGGAAGCATCACAAAGAACAGACACTTCCAAATGGAAACATCATGAATCATCTTTGTCAGATAGATATTCTGATCTCACTGATGATTCTGTGTTATTAGTCCAAGCTATGGAGCTTTCAGGACCAAGGTGA 1893 0.3957 MKMMKPTRVFVDFICFAFFLLWSFSCSHALLSSKGVNFEVQALMDIKETLVDPHGVLDNWDGDAVDPCSWTMVTCSSENLVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGSIPSELGKLPKLQTLDLSNNFFRGEIPSSLGHLKSLQYLRFNNNSLVGECPESLANMTQLSFLDLSYNNLSGPVPRILAKSFSIVGNPLVCATGNEPNCHGITLMPISMNLNNTNQDVLPSSKPKSHKMAIAFGLSLGCLCMIVIGFGLVLWWRHKHNQQPFFDVKDRHHEEVYLGNLKRFPFRELQIATHNFSNKNLVGKGGFGNVYKGILSDGTAVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTSSERLLVYPYMCNGSVASRLKGKPVLDWGTRKNIALGAARGLLYLHEQCDPKIIHRDVKAANILLDNYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKTNYDKIELEETVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAERWEASQRTDTSKWKHHESSLSDRYSDLTDDSVLLVQAMELSGPR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00585 630 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Vivi6g00585 630 Gene3D Phosphorylase Kinase; domain 1 279 386 - -
Vivi6g00585 630 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vivi6g00585 630 SMART serkin_6 310 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00585 630 Pfam Leucine Rich repeats (2 copies) 103 143 IPR025875 -
Vivi6g00585 630 FunFam Putative LRR receptor-like serine/threonine-protein kinase 36 218 - -
Vivi6g00585 630 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 18 590 - -
Vivi6g00585 630 SUPERFAMILY L domain-like 38 205 - -
Vivi6g00585 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Vivi6g00585 630 Gene3D Ribonuclease Inhibitor 36 218 IPR032675 -
Vivi6g00585 630 FunFam Somatic embryogenesis receptor kinase 1 279 386 - -
Vivi6g00585 630 FunFam Somatic embryogenesis receptor-like kinase 1 387 599 - -
Vivi6g00585 630 ProSiteProfiles Protein kinase domain profile. 310 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00585 630 SUPERFAMILY Protein kinase-like (PK-like) 287 580 IPR011009 -
Vivi6g00585 630 Pfam Protein kinase domain 311 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00585 630 Gene3D Transferase(Phosphotransferase) domain 1 387 599 - -
Vivi6g00585 630 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00585 Vivi-Chr6 17705355 17710366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00585 3 630 Receptor kinase-like Gene Family AT5G16000 78.110 0.0 1000
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Vivi6g00585 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00585 - - gmx:100798412 1095.88