Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00547 ATGAGGCCTATAAGTAGTGTATCATCAACAACATCACCAACCAATGTTATCAAGATATGGAAATCACCAATTCCTTATCTATTTGGTGGCTTAGCACTAATGCTCATTTTGATTTCAGTTGCATTGGTGATTCTTGTATGCAACTACAAAAAGCGCGGTTCTTCATCACAATCTTCGAATTCGGATGAAGAAATGAAGCAAGTAATGTCCAAGAATGTTGAGATGGTTAATTCGGAGCCGGAGGTGCTTGTGATCATGGCTGGAGAAGCCAAACCAACTTATTTGGCGAAACCGATTATCAATTCTTCTTTGCCTTATTGTACGTGCGGAGCTGAATCAAGTTTGACTCATTCATCAGGGTTAACGACGAACGAGCAAACGATAAGTAATTAA 393 0.3944 MRPISSVSSTTSPTNVIKIWKSPIPYLFGGLALMLILISVALVILVCNYKKRGSSSQSSNSDEEMKQVMSKNVEMVNSEPEVLVIMAGEAKPTYLAKPIINSSLPYCTCGAESSLTHSSGLTTNEQTISN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00547 130 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 7 118 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00547 Vivi-Chr6 15442112 15442906 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00547 2 130 Glutamine Dumper (GDU) Family AT2G24762 37.594 2.18e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00547 - - mtr:25481192 180.259