Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00534 ATGTTGACATTTCCTCTCCTCAATTTCTCATTGAGAACCACCGTTGATGAATTTCTCTTCCCTAAAAGATCTTTGTTAGCCATGGATAACAAGAGATTTATGATCTTGACACTCGCTCTGTTGGTTCTTAGTTACATTGCTGCGGTAGCAATTCCGGATATTTGGTACATTTTTCAGTTCATGGGATCAACCTCTGCTGTTTGTCTTTCCTTTGTTTTCCCTGGTTCTATTGTTTTAAGGGATATTCATGGTATATCAACGAGAAAGGACAAGATTATAGCACTTGTTATGGTTATACTAGCTGTAGGAACAAGTGTGATTGCTATCTCCAACAACATATAA 342 0.3743 MLTFPLLNFSLRTTVDEFLFPKRSLLAMDNKRFMILTLALLVLSYIAAVAIPDIWYIFQFMGSTSAVCLSFVFPGSIVLRDIHGISTRKDKIIALVMVILAVGTSVIAISNNI 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00534 113 PANTHER AMINO ACID TRANSPORTER 1 102 - -
Vivi6g00534 113 Pfam Transmembrane amino acid transporter protein 1 107 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00534 Vivi-Chr6 14640752 14641189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00534 1 113 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.177 9.92e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00534 - - vvo:131613245 217.624