Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00495 ATGGCAAACTCCATAAACACCATATTTCACACTAAAATCATCACCCTACTATCTCTCTTTTTGCTATTTTCACCTCTAGTTGCTAACTCATACAACCCTGATTACAACTATGCAATCAATTGTGGCAACTCAGAAAACACCACTGCCTCAGACAAACGATTTTGGGTTGGTGATAGTATTCATAACTCCAATATCTTTTCCTTCTCTGAACCAAAATCCACAAACCTATCTCTTACAACAAAACCTACTATCCTTTCAAATACCGAAATTCCATACACATCAGCACGTGTCTCTCTCTCAAATTTCACATACTCATTTTCTAGCATCAATAGTTCTCCTGTTTTTATTCGCCTTCATTTTTATCCAACTTCTTATCAAAACTTTGAACCCTCCACCTCCAATGCAAACTTTTCTGTCAAAATAAACAACAACCTTACTCTCCTTGAAAACTTCAACCCTTCACTTTGGCTTCTTGATGATGAGGAAACAATCACCAAAGAATATTGCATCCAAATCAATCCTAATGAAAAGCTAGACATAACTTTCATTCCCAACAACACAAACCAATCAAATGTTTACTATGCTTTCGTTAACGGGATCGAAGTTGTGTCCATGCCTTCTTATCTCTATTACACTAATCTCAGTGACACAAACTACCGTTCAAAATTTGTCGGGTTTGACAATCAAGAAAACCAAATCCTTAAAGACAAAGCTTTGGAAACGGTTTATAGAGTCAACGTTGGTGGTAGTCAAGTTCCATCAAGTGCTGATACAGGCATGTTTAGAAATTGGGATAATGATTATCCTCTTTACTTGGAGAAACAATATCCACAGAGTGTATCAAGTGATTTCAAACATGTTCTCAACTATAAAGAAGGTACCATTCCAAATTATACTGCACCAGAAAACGTTTACTTAACTGCAAGAAGTTATGGAATGGATGCGACCGATGATTATAACGTAACATGGAATTTTGAAGTTGATTCTGCTTTTACTTATATGGTGAGGTTACATTTTTGTGAGTTTGATTGGAAAATCAAGAACATCGGCGATAGAGTGTTTCAGATTTTCATAGCCGAGACTTTGGCTGAGGGAAACGCTGATGTGATAAGGTGGAGCGGTGGTAACAAAATTCCTGTTTATAAGGATTATGCTGTGACTATGTATTCTGATGAAGGAAGCTCTCAAATTGAAAGAGTTAATCTTACAATCAAGCTACAACGAGTACCAAAAGATATGTACACAATATACCGTGATGTCATATTGAATGGAGTTGAGATACTGAAAATAAGTGATTCAAGTAACAACAATCTTGCAGGATTGAATCCTAATGTTACATCTTCACAGAAAAAAGGATTGCCTGGTTCACAACAGAAGCCGAAGAAGAAGTCAGCTATATTGAAGATTGTTGTGGCTGTAGTTTCATGTCTCTTGCTAGCACTTGTTGTTGTGGGAATAGTAGTTTTTGTAAGAAGGAGCCGAAGAAGATTTGAGTCTCCTCTTGAAATGGAAGAAAGTTCATTGAAGACAAAGAAAGAAGGCTCCTCCTCGGCTTTACCTTCCCATCTGTGCCGCTATTTTACAATAGGGGAGATAAGAGCTGCTACAAACAACTTCGATGATGTTTTTATCATCGGGGTCGGAGGATTTGGTAATGTGTACAAAGGCTACATCGACGGAGCTACACCCGTTGCTATAAAACGTTTGAAATCGGGTTCTCAGCAAGGTGAAAACGAGTTCATGAATGAGATCGAGTTGCTATCTGAGCTTCGTCATATTCACTTGGTTTCTCTGATTGGATATTGTAACGATGGTGCAGAGATGATTCTTGTTTACGATTTCATGCAACGCGGTACTCTTCGTGAATATCTCTATGATTCGGACAATGAACCGCTTACTTGGAAGCAAAGACTCGAGATTCTATTGGGTGCTGCGAGGGGGTTGCATTATCTTCACGCAGGTGCAAAGCACAATATCATACACCGTGATGTGAAGAGTACTAACATATTGATTGATGAGAAATGGGTGGCTAAGGTTTCTGATTTCGGACTATCAAAAGTAGGACCAACGGGGATGTCGATTACTCATGTCAGCACGGTGGTGAAGGGTAGTATCGGGTATTTGGATCCAGAGTACTACTTACGTCAAAGATTGACTCTTAAGTCTGACGTGTACTCTTTCGGTGTAGTGCTTCTAGAGGTGTTATGCGCGAGGCCTCCTTTAATTCGTTCTGTAGATAAGAAAAACGTGAGTTTGGTCGTTCGCTTCCAAAGATGTTACAAGGAAGGTGTGATAATTGAAGAGATGGTGGATCCATTCATAAAGGATTCTATAACAGATGAGTGTTTGAAATGTTATTGTCAGATGGTGTTGAGTTGTTTGCGTGATGATGGGAGTCAAAGGATGTCCATGAGTGACGTTGTTGGGGCTTTAGAGTTTGCATTGCAGTTGGAGATGAGTGAGGAAGATAGTAAGTTTGGTGGGACTCAAGAAAAGGAAAAAAGTGAGCAAAGGATACAATATCCAAAGTTTGCGAGTGATGATGGGAGTGACATGCGTTTCACAAGTAGTAGTGGTGATTATGGGTCTAATACCAGCAAGGTAAGTACCATTTCAGTCACTAGTGAATATCAACCTCTGTTTTCTACTGATGTGTTTTCTGAAGTTGGGAATCCAAAAGCGCGTTAG 2688 0.3917 MANSINTIFHTKIITLLSLFLLFSPLVANSYNPDYNYAINCGNSENTTASDKRFWVGDSIHNSNIFSFSEPKSTNLSLTTKPTILSNTEIPYTSARVSLSNFTYSFSSINSSPVFIRLHFYPTSYQNFEPSTSNANFSVKINNNLTLLENFNPSLWLLDDEETITKEYCIQINPNEKLDITFIPNNTNQSNVYYAFVNGIEVVSMPSYLYYTNLSDTNYRSKFVGFDNQENQILKDKALETVYRVNVGGSQVPSSADTGMFRNWDNDYPLYLEKQYPQSVSSDFKHVLNYKEGTIPNYTAPENVYLTARSYGMDATDDYNVTWNFEVDSAFTYMVRLHFCEFDWKIKNIGDRVFQIFIAETLAEGNADVIRWSGGNKIPVYKDYAVTMYSDEGSSQIERVNLTIKLQRVPKDMYTIYRDVILNGVEILKISDSSNNNLAGLNPNVTSSQKKGLPGSQQKPKKKSAILKIVVAVVSCLLLALVVVGIVVFVRRSRRRFESPLEMEESSLKTKKEGSSSALPSHLCRYFTIGEIRAATNNFDDVFIIGVGGFGNVYKGYIDGATPVAIKRLKSGSQQGENEFMNEIELLSELRHIHLVSLIGYCNDGAEMILVYDFMQRGTLREYLYDSDNEPLTWKQRLEILLGAARGLHYLHAGAKHNIIHRDVKSTNILIDEKWVAKVSDFGLSKVGPTGMSITHVSTVVKGSIGYLDPEYYLRQRLTLKSDVYSFGVVLLEVLCARPPLIRSVDKKNVSLVVRFQRCYKEGVIIEEMVDPFIKDSITDECLKCYCQMVLSCLRDDGSQRMSMSDVVGALEFALQLEMSEEDSKFGGTQEKEKSEQRIQYPKFASDDGSDMRFTSSSGDYGSNTSKVSTISVTSEYQPLFSTDVFSEVGNPKAR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00495 895 CDD STKc_IRAK 545 812 - -
Vivi6g00495 895 ProSitePatterns Protein kinases ATP-binding region signature. 545 567 IPR017441 GO:0005524
Vivi6g00495 895 Gene3D - 237 429 - -
Vivi6g00495 895 Gene3D - 32 206 - -
Vivi6g00495 895 MobiDBLite consensus disorder prediction 824 841 - -
Vivi6g00495 895 SMART serkin_6 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00495 895 ProSiteProfiles Protein kinase domain profile. 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00495 895 MobiDBLite consensus disorder prediction 823 865 - -
Vivi6g00495 895 Pfam Protein tyrosine and serine/threonine kinase 545 808 IPR001245 GO:0004672|GO:0006468
Vivi6g00495 895 Gene3D Phosphorylase Kinase; domain 1 501 614 - -
Vivi6g00495 895 FunFam FERONIA receptor-like kinase 36 206 - -
Vivi6g00495 895 Gene3D Transferase(Phosphotransferase) domain 1 615 837 - -
Vivi6g00495 895 FunFam FERONIA receptor-like kinase 237 431 - -
Vivi6g00495 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Vivi6g00495 895 Pfam Malectin-like domain 39 429 IPR024788 -
Vivi6g00495 895 FunFam receptor-like protein kinase FERONIA 502 614 - -
Vivi6g00495 895 MobiDBLite consensus disorder prediction 850 865 - -
Vivi6g00495 895 SUPERFAMILY Protein kinase-like (PK-like) 513 813 IPR011009 -
Vivi6g00495 895 PANTHER OS03G0124300 PROTEIN-RELATED 15 503 IPR046957 GO:0004672
Vivi6g00495 895 FunFam Receptor-like protein kinase FERONIA 615 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00495 Vivi-Chr6 13040867 13043830 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00495 26 895 Receptor kinase-like Gene Family AT3G51550 45.285 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi6g00495 Malectin_like 1.4e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00495 - - mtr:25497555 1026.16