Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00485 ATGAGGCTTCTTATATCAGCTCTATGTGTCACTGTGCTATGTTCTTATGCAGCGGCATATGATCCTTTGGATCCTGACGGAAACATAACGATCAAATGGGATGTTGTCTCGTGGACACCGGATGGCTATGTGGCGGTGGTAACGATGAGCAATTTCCAAATGTACCGACACATAATGAATCCGGGATGGACATTAGGATGGTCATGGGCTAAGAAAGAAGTCATATGGTCAATGGTAGGATCTCAAACAACTGAACAAGGAGATTGTTCAAAATTCAAAGGAAATGTGCCTCACTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAACCTACAATTCTCAAACTGTTGTAAGGGTGGAGTTGTAGCAGCATGGGGACAAGACCCTTCATCAGCTGTTTCATCTTTTCAAATCAGTGTTGGGCAAGGTGGTACTTCAAACAAGACAGTTAAACTTCCGAAGAACTTCACGCTCTCGGCTCCCGGACCTGGCTATACGTGCGGTCCGGCTAAGATTGTTCCGTCCACCACTTTTCTCACATCGGATAAGCGCCGCAAAACTCAAGCACTTATGACATGGAATGTAACATGTACATATTCACAATTTCTTGCAAGAAAGAACCCAAGTTGCTGTGTTTCTTTGTCATCTTTCTATAATGAGACTATTACTCCTTGTCCTTCTTGTGCTTGTGGATGCCAGAACAATAAGAATTGTGTCAAGGGTCATTCTAAATTCCTGGACATGGTAGGGTTACATACACCAAAGAGAGACAATGAACCATTGCTACAATGCACTCATCATATGTGCCCAATAAGAGTACACTGGCATGTGAAGGTTAACTATAAGGACTATTGGAGAGTCAAGATAGCTGTGACAAATTTCAATTATAGATTGAATTATTCTCTTTGGACTCTTGCTGTACAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTTTGCTTCCCTATCAATCCATAAATGACACAGGTATGTTCTATGGCATGAAATTCTTCAATGATCTCTTGATGGAAGCTGGACCAAGTGGAAATGTTCAATCAGAAGTGCTTCTTCAAAAGAACAAGGAAACATTCACTTTTAACCAAGGATGGGCATTTCCTAGAAGAGTTTACTTCAATGGTGAAGAATGCATGATGCCACCACCAGATACCTACCCTTACCTCCCTAATTCTTCCCCTATGAATGCCCTCAACTTCCAAGCACTCATCACCTCATTCCTTCTCTTGCTAGCTCTTTGGTGA 1296 0.4213 MRLLISALCVTVLCSYAAAYDPLDPDGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNLQFSNCCKGGVVAAWGQDPSSAVSSFQISVGQGGTSNKTVKLPKNFTLSAPGPGYTCGPAKIVPSTTFLTSDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNNKNCVKGHSKFLDMVGLHTPKRDNEPLLQCTHHMCPIRVHWHVKVNYKDYWRVKIAVTNFNYRLNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYQSINDTGMFYGMKFFNDLLMEAGPSGNVQSEVLLQKNKETFTFNQGWAFPRRVYFNGEECMMPPPDTYPYLPNSSPMNALNFQALITSFLLLLALW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00485 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Vivi6g00485 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Vivi6g00485 431 PANTHER PROTEIN COBRA 8 423 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00485 Vivi-Chr6 12592601 12595578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00485 19 430 COBRA Gene Family AT3G29810 68.523 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00485 - - gmx:100783410 828.55