Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00484 ATGGGTTTCTCTTTGTTATCAAAACCAACAACACCTTGTATAGTTTTGCTCTTGTTCCTACTCTCTTTCACTTGTTTCACTTCAACAGATGCTTATGACCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTATAAATTGGACACCTGATGGTTATGTTGCCGTTGTTACAATGAATAACTTCCAACAATATCGTCACATTGCTTCGCCTGGCTGGTCGCTAGGATGGACATGGGCTAAAAAGGAGGTAATCTGGGCAATGGTGGGATCGCAGACGACCGAGCAAGGTGACTGTTCGAAATTCAAAGGAAATGTGCCACATTGCTGTAAAAAGGATCCAACCGTTGTTGATCTACTTCCCGGAACACCTTACAACCAGCAAATTGCGAATTGCTGCAAAGGCGGGGTGCTTAGTTCATATGCTCAGGATCCTACCAACGCAGTTGCGTCGTTTCAAGTGAGTGTCGGTAGAGCTGGAACCACGAATAAAACCGTTAAAGTCCCGAAAAACTTCACATTGAAAGCACCCGGACCGGGTTATACTTGTGGCCCGGCGAAAGTAGTTAGACCTACTCAGTTTATTCAACCCGACAAAAGAAGAACGACCCAAGCACTCATGACATGGAATGTTACATGCACATATTCACAGTTTCTAGCACAGAAAACTCCCACTTGCTGCGTATCGCTCTCGTCTTTCTATAACGAAACCATCGTACCGTGTCCAACATGTGCGTGTGGCTGCCAGAGTAATGCGTCTCAGTCGGGGACTTGCGTAAATCCAAATACACCGCATTTGGCATCGGTTGTTTCTGGTAACGGAAGGAATAGTTTATCGCCTTTGGTTCAATGTACTAGTCATATGTGTCCGATCCGAATCCATTGGCATGTTAAAGTTAACTACAAGGAATACTGGCGTGTGAAAGTTACGATTACGAATTTTAATTACCGTATGAATTATTCCGATTGGAACTTGGTTGTTCAGCATCCGAACTTCGAAAATATTACTCAGCTGTTCAGTTTCAACTACCAGTCATTAAATCCTTATGGTTCGATAAATGATACGGCAATGCTTTGGGGAGTTAAGTTCTATAACGATTTTCTTAATCACGCCGGCCCTAGTGGCAATGTTCAATCGGAGTTACTCTTCCGAAAGGATAAATCGACTTTCACTTTCGATAAGGGTTGGGCGTTCCCTCGCAGAATCTACTTCAACGGCGACAACTGTGTGATGCCACCACCCGATGCTTATCCATGGTTACCTAATGCTGGTTCTCGGCACGAGGTTTCGTTGTTAGCTTTATTGATGACCTCCTTAGTAGTCCTTGTATTTTACGCATACATTTAA 1353 0.4353 MGFSLLSKPTTPCIVLLLFLLSFTCFTSTDAYDPLDPNGNITIKWDIINWTPDGYVAVVTMNNFQQYRHIASPGWSLGWTWAKKEVIWAMVGSQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSYAQDPTNAVASFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKVVRPTQFIQPDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVPCPTCACGCQSNASQSGTCVNPNTPHLASVVSGNGRNSLSPLVQCTSHMCPIRIHWHVKVNYKEYWRVKVTITNFNYRMNYSDWNLVVQHPNFENITQLFSFNYQSLNPYGSINDTAMLWGVKFYNDFLNHAGPSGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRHEVSLLALLMTSLVVLVFYAYI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00484 450 PIRSF COBRA 4 450 IPR006918 GO:0010215|GO:0016020
Vivi6g00484 450 PANTHER PROTEIN COBRA 19 440 IPR006918 GO:0010215|GO:0016020
Vivi6g00484 450 Pfam COBRA-like protein 55 218 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00484 Vivi-Chr6 12589101 12592456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00484 1 448 COBRA Gene Family AT3G02210 72.284 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00484 - - gmx:100783820 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00484 6 12589101 12592456 Vivi6g00484 6 12589101 12592456 ECH