Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00482 ATGGTTGATGAAGTGAAGATCATAGAACAATGTCAAGTGAGTCCTCCACAAGGTTCACTTCCATCTTCAATCAATCTTCCATTAACTCACCTTGACCTCTTTTGGTTTTATTGTCCCCTTGTCAAAAGAATTTTCTATTACAACTTTCCTCATTCGACACAACACTTCCTTCAAACCTCACTCCCAATTCTTAAAAAATCTCTTTCCCTCACTCTCCAACATTTCTTCCCATTTTGTTCCAAATCCATTTTACCTCCTAAGCCTCAAACTCCTCACATTCTCTACACTCAAGGTGACTCCCTCTCATTAACAATATGTGAATCCAATTCAAATTTCAACAACCTCATATCTAATTCACCAAAAGATCTCACACTTGCCTACCCTTTTGTTCCTTTGACTTCTCCACCAACTACTTTACAAGATGGCACATTGTTGTTTCCAACAATGGCAATTCAAATCACTATTTTTCCAAACTTTGGATTCACACTTTGTTTCTCTTTTAGACATGAAATTGTTGATGGTAAATCATTTCATCATTTCATTAAATTTTGGTCCTCACTATCTAAAGGAAACTTAGAAATTTCCTCTCTTCCATTACCATTTCACAAAAGGGAAATAATCCAAGACCCTAAAGGTCTTAAACAAAACCACTTAGAAAAACTTTGGAATTCTCCACCAAAAACAATAGAATCTACTATCTCCACCCATGACCATGTTTCTTCAAGAAACAATTTGGTTCGTTATAGATTTAATTTGACACGTCATCATGTTGATAATTTGAAGAAATGGGTGGTTACAAAAAGCCAAAATATTGGTCTTGAAATGTTGCATTTGTCAACCTTTGTTGTTACATGTTCTTTGTTATGGGTTAGTATGGTAAAATTAAAATCACAAGACAAGAAAAACATCATCGTTGATTGTGTTGCAGATGAGGTAACAAATAATTCAACTTTGGAGAATGATTTGGAGGATAACTATGGATTTAAATGTCTAATGGATATGCGTAACCGTTTTGAACTTTCAATTCCTTCCACATATTTTGGAAATTGTTTGATGCCATTGGAGGCAAAACTACCAAAATGGAAGCTATTGGAAGAGAATGGTATATGTGAAGCAGCAAATGTTATTGCAAGAGAAATTAGTTTGGCAAACCCTTCAAAAGAAGCTAAAAAGTTTGATGTAAAGTCACAAAATATTACTCGTGCTATAGGGTCACCAAAATTTGGTGTGTATGAAACAAACTTTGGATGGGGGAACCCTATTTTGAGTGAAATACTACATGTGAATGATTCAAGTGAATTACTTCTTTCTGATTCTAAGGATGGAGATGGTGGTATTGAAGTTTCTATGGTGTTAGAAGAAGCTCAAGTGAAGAAATTTAGTGACATCTTAGAAGTGGAACTTAGAGACATTGTAGTTTTTGAATGA 1428 0.3459 MVDEVKIIEQCQVSPPQGSLPSSINLPLTHLDLFWFYCPLVKRIFYYNFPHSTQHFLQTSLPILKKSLSLTLQHFFPFCSKSILPPKPQTPHILYTQGDSLSLTICESNSNFNNLISNSPKDLTLAYPFVPLTSPPTTLQDGTLLFPTMAIQITIFPNFGFTLCFSFRHEIVDGKSFHHFIKFWSSLSKGNLEISSLPLPFHKREIIQDPKGLKQNHLEKLWNSPPKTIESTISTHDHVSSRNNLVRYRFNLTRHHVDNLKKWVVTKSQNIGLEMLHLSTFVVTCSLLWVSMVKLKSQDKKNIIVDCVADEVTNNSTLENDLEDNYGFKCLMDMRNRFELSIPSTYFGNCLMPLEAKLPKWKLLEENGICEAANVIAREISLANPSKEAKKFDVKSQNITRAIGSPKFGVYETNFGWGNPILSEILHVNDSSELLLSDSKDGDGGIEVSMVLEEAQVKKFSDILEVELRDIVVFE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00482 475 Gene3D - 242 470 IPR023213 -
Vivi6g00482 475 PANTHER - 5 469 - -
Vivi6g00482 475 Gene3D - 4 233 IPR023213 -
Vivi6g00482 475 Pfam Transferase family 5 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00482 Vivi-Chr6 12529666 12532218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00482 36 464 Monolignol Biosynthesis Gene Families AT5G48930 21.978 1.88e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00482 - - mtr:120579473 616.69