Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00481 ATGTTCTTCATCGTTTTCAAAGAATATTCATCAATATTCAGTAAACAGCTCCACCAGAAAAACATGGCTACCACCTTAAATGAACCTTTACTTGGATATGCCAAAGATGATGAAGAGAAAGACATAGCATCTTACCTTCCTAACAAACACGAAGTATCTTTCTTTCGAACATGTTTCAATGGAATCAATGTAATTCTAGGTATTGGAATACTATCGGTACCACATGCATTAGCTTCGGGAGGGTGGTTAAGTTTAGCACTTTTATTTTCTATTGCGGGGGTAGCATTTTACACCGGTTTATTAATGAAGCGATGCATGGATATAAATTCGAATATTACAACATATCCTGATATAGGCGAACTTGCATTCGGAAAAACCGGAAGATTGATAGTATCCACATTGATGTATACGGAACTATACTTGATTTCGGTAGGTATTTTGATTCTAGAAGGAGATAATTTGAGTAAATTATTTCCTATTGGAGATTTTGAAGTTGTTGGTTTTTCATTTAGTGCAAACAATTTCTTTGTGATATTGGTTGCACTAATTATTTTGCCAACGGTTTGGTTGGATAATCTGAGTTTACTTTCGTATGTATCTGCAAGCGGTGTCTTTGCTTCGGTTATTATTATTTTGTCGATATTATGGACCGCGACATTTGATGGAGACGGTGTTCATCAAAAGGGTGATATTGTTAATTGGAAGGGAATCCCTACTGCTCTTAACTTGTATGCTTTTTGTTTTTGTGCACATCCGGTTTTTCCGACTCTCTATAGTTCCATGAGGAAAAAACATCAATTCTCCAATGTCCTAATTTTATGCTTTGTATTAGCTACAGTTGGTTATGCATCAATGGCTATAATAGGTTACTCGATGTTTGGTTCAAAAGTTGAATCACAAGTAACATTAAATTTGCCACTAGACAAAATAAGTTCGAAAATAGCGATATACACGACATTGGTGAATCCGATATCGAAGTTTGCTTTGATGGTGACACCGATTACGAATAGTTTAAAAGATTTACTTCCAAAGAGATATCAAAATAATAGAATGTCGAATATTTTTGTGAGTGCGGCTCTTGTAATTAGCAATGTTATTGTTGCATTGTGTGTTCCATTATTTGGATCTCTCATGTCATTGGTTGGAGCATTTTTGAGTTTCACTGCTTCTATTTTGCTTCCTTGTTTGTGTTACTTGAAGATTTCAGGGACTTATAGGAAACTTGGATTTGAGACTATGACAATAGTGGTGATAATAATAATGGCTATAACAATGGCAATATATGGGACTTATACTTCAATTGTTGAAATAGTCCAAAATTTGTAA 1326 0.3462 MFFIVFKEYSSIFSKQLHQKNMATTLNEPLLGYAKDDEEKDIASYLPNKHEVSFFRTCFNGINVILGIGILSVPHALASGGWLSLALLFSIAGVAFYTGLLMKRCMDINSNITTYPDIGELAFGKTGRLIVSTLMYTELYLISVGILILEGDNLSKLFPIGDFEVVGFSFSANNFFVILVALIILPTVWLDNLSLLSYVSASGVFASVIIILSILWTATFDGDGVHQKGDIVNWKGIPTALNLYAFCFCAHPVFPTLYSSMRKKHQFSNVLILCFVLATVGYASMAIIGYSMFGSKVESQVTLNLPLDKISSKIAIYTTLVNPISKFALMVTPITNSLKDLLPKRYQNNRMSNIFVSAALVISNVIVALCVPLFGSLMSLVGAFLSFTASILLPCLCYLKISGTYRKLGFETMTIVVIIIMAITMAIYGTYTSIVEIVQNL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00481 441 Pfam Transmembrane amino acid transporter protein 51 434 IPR013057 -
Vivi6g00481 441 PANTHER OS05G0424000 PROTEIN-RELATED 63 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00481 Vivi-Chr6 12512597 12514367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00481 38 438 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.362 1.32e-163 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00481 K15015 - gmx:100794374 587.415