Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00475 ATGGCAAACTCCATAAACACCATATTTCACACTAAAATCTTCACCCTACTATCTCTCCTTTTGCTATTTTCACCTCTAGTTGCTAACTCATACAACCCTGATTACAACTATGCAATCAGTTGTGGTAACTCAGCAAACACTACTGCCTCAGACAAACGATTTTGGGTTGGTGATAGTATTCTTAACTCCAATATCTTTTCCTTCTCTGAACCAAAATCCTCAAACCTATCTCTTACAACAAAACCTACTTCCCTTTCAAATACCGAAATTCCATACACATCAGCACGTGTCTCTCTCTCAAATTTCACATACTCATTTTCTAGCATCAATACTTCTCCTGTTTTTATTCGCCTTCATTTTTATCCAACTTCTTATCAAAACTTTGAACCCTCCACCTCCAATGCAAACTTTTCTGTCAAAATAAACAACAACCTTACTCTTCTTGAAAACTTCAACCCTTCACTTTGGCTTCAAGATGATGAGGAAAAAATCATCAAAGAATATTGCATCCAGATCAATCCTAACGAAAAGCTAGACATAACTTTCATTCCCAACAACACAAACCAATCAAATGTTTACTATGCTTTCGTTAACGGGATCGAAGTTGTGTCCATGCCTTCTTATCTCTATTACACTAATCTCAGTGACACAAACTACCGTTCAAAATTTGTCGGGTTTGACAATCAAGAAAACCAAATTCTTAAAGACAAAGCTTTGGAAACGGTTTATAGAGTCAACGTTGGTGGTAGTCAAGTTCCATCAAGTGCTGATACAGGCATGTTTAGAAATTGGGAGAATGATTATCCTCTTTACTTGGAGAAACAATATCCACAGAGTGTATCAAGTGATTTCAAACATGATCTCAACTATAAAGAAGGTACCATTCCAAATTATACTGCACCAGAAGACGTTTACTTAACTGCAAGAAGTTATGGAATGGATGCGACCGATGATTATAACGTAACATGGAATTTTGAAGTTGATTCTGCTTTTACTTATACGGTAAGGTTACATTTTTGTGAGTTTGATGCGAAAATAACCAAACCACGGGATAGAGTGTTTCAGATTTTCATAGCAGACACTTTGGCGGAGGGAAATGCCGATGTGATAGAGTGGAGTGGTGGTAACAAGATTCCTGTTTATAAGGATTATGCTGTGACTATGTACTCTCAACAAGGAAGCACTCAAATTGAAAGAGTTAATCTTACAATCAAGCTACAACGAGTACCAAAAGATATGTACACAATATACCGTGATGTCATATTGAATGGAGTTGAGATACTGAAAATAAGTGATTCAAGTAACAACAATCTTGCAGGATTGAATCCTAATGTTACATCTTCACAGAAAAAAGGATTGCCTGGTTCACAACAAAAGCCGAAGAAGAAGTCAGCTATATTGAAGATTGTTGTGGCTGTTGTTTCATGTCTCTTGCTAGCATTTGTTGTTGTGGGAATAGTGGTTTTTGTAAGAAGGCGGAGAAGATTTGAGTCTCCTCTTGAAATGGAAGAAAGTTCATTGAAGACAAAGAAAGAAGGCTCCTCCTCGGCTTTACCTTCCCATCTGTGCCGCTATTTTACAATAGGGGAGATAAGAGCTGCTACAAACAACTTCGATGATGTTTTTATCATCGGGGTTGGAGGATTTGGTAATGTGTACAAAGGCTACATCGACGGAGCTACACCCGTTGCTATAAAACGTTTGAAATCGGGTTCTCAGCAAGGTGAAAACGAGTTCATGAATGAGATCGAGTTGCTATCTGAGCTTCGTCATATTCACTTGGTTTCTCTGATTGGATATTGTAACGATGGTGCAGAGATGATTCTTGTTTACGATTTCATGCAACGCGGTACTCTTCGTGAATATCTCTATGGTTCGGAGAATGAACCGCTTTCTTGGAAGCAAAGACTCGAGATTCTATTGGGTGCTGCGAGGGGGTTGCATTATCTTCACGCAGGTGCAAAGCACAATATCATACACCGTGATGTGAAGAGTACTAACATATTGATTGATGACAAATGGGTGGCTAAGGTTTCTGATTTCGGACTATCAAAAGTAGGACCAACGGGGATGTCGATTACTCATGTCAGCACTGTGGTGAAGGGTAGTATCGGGTATTTGGATCCAGAGTACTACTTACGTCAAAGATTGACTCTTAAGTCTGACGTGTACTCTTTCGGTGTGGTGCTTCTAGAGGTGTTATGCGCGAGGCCTCCTTTAATTCGTTCTGTAGATAAGAAAAACGTGAGTTTGGTCGTTCGCTTCCAAAGATGTTACAAGGAAGGTGTGATAATTGAAGAGATGGTGGATCCATTCATAAAGGATTCTATAACAGAGGAGTGTTTGAAATGTTATTGTCAGATGGTGTTGAGTTGTTTGCATGATGATGGGAGTCAAAGGATGTCCATGAGTGATGTTGTTGGGGCTTTAGAGTTTGCATTGCAGTTGGAGATGAGTGAGGAAGATAGTAAGTTTGGTGGGACTCAAGAAAAGGAAAAAAGTGAGCAAAGGATACAATATCCAAAGTTTCCGAGTGACGATGGGAGTGACATGCGTTTCACAAGTAGTAGTGGTGATTATGGGTCTAATACCAGCAAGGTAAGTACCATTTCAGTCACTAGTGAAACTCAACCTCTGTTTTCTACTGATGTGTTTTCTGAAGTTGGGAATCCAAAAGCGCGTTAG 2685 0.3933 MANSINTIFHTKIFTLLSLLLLFSPLVANSYNPDYNYAISCGNSANTTASDKRFWVGDSILNSNIFSFSEPKSSNLSLTTKPTSLSNTEIPYTSARVSLSNFTYSFSSINTSPVFIRLHFYPTSYQNFEPSTSNANFSVKINNNLTLLENFNPSLWLQDDEEKIIKEYCIQINPNEKLDITFIPNNTNQSNVYYAFVNGIEVVSMPSYLYYTNLSDTNYRSKFVGFDNQENQILKDKALETVYRVNVGGSQVPSSADTGMFRNWENDYPLYLEKQYPQSVSSDFKHDLNYKEGTIPNYTAPEDVYLTARSYGMDATDDYNVTWNFEVDSAFTYTVRLHFCEFDAKITKPRDRVFQIFIADTLAEGNADVIEWSGGNKIPVYKDYAVTMYSQQGSTQIERVNLTIKLQRVPKDMYTIYRDVILNGVEILKISDSSNNNLAGLNPNVTSSQKKGLPGSQQKPKKKSAILKIVVAVVSCLLLAFVVVGIVVFVRRRRRFESPLEMEESSLKTKKEGSSSALPSHLCRYFTIGEIRAATNNFDDVFIIGVGGFGNVYKGYIDGATPVAIKRLKSGSQQGENEFMNEIELLSELRHIHLVSLIGYCNDGAEMILVYDFMQRGTLREYLYGSENEPLSWKQRLEILLGAARGLHYLHAGAKHNIIHRDVKSTNILIDDKWVAKVSDFGLSKVGPTGMSITHVSTVVKGSIGYLDPEYYLRQRLTLKSDVYSFGVVLLEVLCARPPLIRSVDKKNVSLVVRFQRCYKEGVIIEEMVDPFIKDSITEECLKCYCQMVLSCLHDDGSQRMSMSDVVGALEFALQLEMSEEDSKFGGTQEKEKSEQRIQYPKFPSDDGSDMRFTSSSGDYGSNTSKVSTISVTSETQPLFSTDVFSEVGNPKAR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00475 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Vivi6g00475 894 Gene3D - 32 206 - -
Vivi6g00475 894 Gene3D - 237 429 - -
Vivi6g00475 894 Pfam Malectin-like domain 39 429 IPR024788 -
Vivi6g00475 894 Gene3D Transferase(Phosphotransferase) domain 1 614 836 - -
Vivi6g00475 894 CDD STKc_IRAK 544 811 - -
Vivi6g00475 894 MobiDBLite consensus disorder prediction 823 840 - -
Vivi6g00475 894 FunFam FERONIA receptor-like kinase 237 431 - -
Vivi6g00475 894 MobiDBLite consensus disorder prediction 849 866 - -
Vivi6g00475 894 FunFam Receptor-like protein kinase FERONIA 614 834 - -
Vivi6g00475 894 SMART serkin_6 538 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00475 894 FunFam receptor-like protein kinase FERONIA 501 613 - -
Vivi6g00475 894 PANTHER OS03G0124300 PROTEIN-RELATED 14 502 IPR046957 GO:0004672
Vivi6g00475 894 Pfam Protein tyrosine and serine/threonine kinase 544 808 IPR001245 GO:0004672|GO:0006468
Vivi6g00475 894 MobiDBLite consensus disorder prediction 822 866 - -
Vivi6g00475 894 FunFam FERONIA receptor-like kinase 36 206 - -
Vivi6g00475 894 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Vivi6g00475 894 ProSiteProfiles Protein kinase domain profile. 538 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00475 894 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524
Vivi6g00475 894 Gene3D Phosphorylase Kinase; domain 1 500 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00475 Vivi-Chr6 12389123 12392206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00475 26 894 Receptor kinase-like Gene Family AT3G51550 45.395 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi6g00475 Malectin_like 1.8e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00475 - - mtr:25497555 1030.39