Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g00459 ATGGAAAAATACTCTACTATGACAAACTCCATAAACAAAAAACTTAACACTAAAATAACCATATTGTCTTTCTTTATCCTACTATATCCTCTAGTTGCTAACTCATACAAACCAGATTACATTTTAGCCATCAATTGTGGTTCAACCACCACTACTGCCTTAGATAATCGAACTTGGGTTGGTGACATTATTGATAACACAAATCTTTTTTCCTTCATTGAGCCACAACAAGAACCTAATTCCCTTTCAAATACCGAAACTCCATACACATCAGCACGTGTCTCTCTCTCAAATTTCACTTACTCATTTTCTAGCATCAATAGTTCTCCTGTTTTTATTCGCCTTCATTTTTACCCAACTTCTTATCAAAACTTTGAACCCTCCAATGCAAATTTTTCTGTCAAAGTAAACAACAACCTTACCCTTCTTAAAAACTTCAACCCTTTACATTGGCTTCAATATGATGATGAAAAAATCACCAAAGAATTTTGCATCCATATCGAACCATATGAGAATCTAGACATAACTTTCATTCCCAACAGCACAAAATCGAATCCTTATTATGCTTTTATTAACGGAATCGAAATCGTGTCTATGCCTTCTTTTCTCTATTATACTGATCTCGATGATACAAACTATCATTTAAACTTACTTGGCTTTGACGACAGTGCTAGCGAATTTCCAGTTCGTAACGACAAAGCATTGGAGACGGTTTATAGAGTGAATGTTGGTGATAATCAAGTTCCACCAAATGATGATACCGGTATGTTTCGTAATTGGGACAACGATTTTCCTCTTTACTTGGAGAAACAATATCCAAAATCTGTATCAACTGCTTTTGGTTACCATCTCAACTATGTAAACAATACGATTCCAAATTATACTGCACCAGAAGCTGTTTACTTAACTGCAAAAAGTTATGGAATGAATGAAACACACAATTATAATGTAACTTGGAACTTTGAAGTTGATTCTGCTTTTATTTACATGGTAAGGTTACATTTTTGTGAGTTTGATTCGCATATCAAGAATCCAGGCGATAAAGTATTTCAGATTTTCATAAATGATATTTTGGCTGAGGAAAAGGCTGATGTGATAAGTTGGAGTGGTGGTAACAAGATTCCTGTTCATAAGGATTATGCTGTGACTATGGACACTCTAAAAGGAAGTTCTCAAAATGAAAGAGCTAATCTTTCAATCAAGTTACAACGAGCACCAAAAACTATCCTCACACGATACCACGATGTCTTACTGAATGGAATTGAGATTTTGAAAGTAAGTGATAACAGTAACAATTTTGCAGGATTAAATCCCAAATATTTATCTCCATTGCCAGTATCAAATAAACAACCAAGGTCAAAGAAATCAATCTTATTGGTTGGATCTTCATGTCTCTTGCTAACATTTGTTGTTGTGGGAACACTGTTTTGGCTAAGGAGAAGGGTTAAGAATGGTATGGGAGATGATAACAGGTCGAAGACAAAGAATGGAGGGTCACAATCTTTGCCTCCCCATTTGTGCCGATATTTCACAATCATGGAGATCAAAGCAGCCACAAACAACTTCGATGATGCTTTCATCATTGGTGTTGGAGGATTTGGCAACGTCTACAAAGGCTTCATTGATGGATCCACACAAGTTGCGATAAAACGCCTTAAACAAGGCTCTCAACAAGGTGCCAACGAGTTCATGAACGAGATCGAGTTACTATCCCAACTTCGCCACATTCACTTGGTATCTCTAGTCGGATATTGCAACGATGGCATTGAGATGATTCTGGTTTATGAGTTTATGCAACACGGTACTCTCTGTGAGTATCTCTATGGTTCCAATAACCAACCTCTACCGTGGAAGTTAAGGCTTGACATTCTATTAGGTGCAGCAAGAGGGTTGAATTATCTTCATGCTGAGGTAAAACACAAGATAATACATCGTGACGTGAAGAGCACCAACATATTGTTGGATGAAAAATGGGTGGCTAAGGTTTCTGACTTCGGGTTATCCAAGGTTGGACCGACGGGGATATCGACCACACATGTTAGCACAATGGTGAAGGGTAGTCTTGGGTATTTAGATCCTGAGTATTATATGCTCCAAAGGCTGACTCTAAAATCAGACGTGTACTCGTTCGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGACCACCTTTGGTTCGTGATTTGGATAAGAAGACTGCTAGTCTAGTTTGTTGGTTTCAAAAATGTTATGATGAAGGTGTGGCAATTGAACAAATAATAGATCCTTTTCTAAGGGGTTCTATCACGAATGAGTGTTTGGAATGCTATTGCAAGTTGGCATTGAGTTGTTTGCATGATGATGGAACTCAACGACCCTCAATGAGTCAAGTGGTTGGTGATTTAGAGTTTGCTTTGCAATTGGTGGTGAGGAAGGGAGATAACCAATTTGGTACAACCCAAAAAGAGGAAACACTTGTGAAAATACCACAGTTCTCTCAGTTTATGAGCGATGAAGAGAGTGACATTCATTTTGCTAGATCACACTCATACAAGGAGAGCACAGCCTCAGCGAGGCTAAATACTCAAAATTATTCTTTCTTTGATATTGGAAATCAACGACCACGATCACATTCGAGTGAAAACCTCAAAGTCTACATTTAG 2640 0.3788 MEKYSTMTNSINKKLNTKITILSFFILLYPLVANSYKPDYILAINCGSTTTTALDNRTWVGDIIDNTNLFSFIEPQQEPNSLSNTETPYTSARVSLSNFTYSFSSINSSPVFIRLHFYPTSYQNFEPSNANFSVKVNNNLTLLKNFNPLHWLQYDDEKITKEFCIHIEPYENLDITFIPNSTKSNPYYAFINGIEIVSMPSFLYYTDLDDTNYHLNLLGFDDSASEFPVRNDKALETVYRVNVGDNQVPPNDDTGMFRNWDNDFPLYLEKQYPKSVSTAFGYHLNYVNNTIPNYTAPEAVYLTAKSYGMNETHNYNVTWNFEVDSAFIYMVRLHFCEFDSHIKNPGDKVFQIFINDILAEEKADVISWSGGNKIPVHKDYAVTMDTLKGSSQNERANLSIKLQRAPKTILTRYHDVLLNGIEILKVSDNSNNFAGLNPKYLSPLPVSNKQPRSKKSILLVGSSCLLLTFVVVGTLFWLRRRVKNGMGDDNRSKTKNGGSQSLPPHLCRYFTIMEIKAATNNFDDAFIIGVGGFGNVYKGFIDGSTQVAIKRLKQGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNDGIEMILVYEFMQHGTLCEYLYGSNNQPLPWKLRLDILLGAARGLNYLHAEVKHKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMLQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKKTASLVCWFQKCYDEGVAIEQIIDPFLRGSITNECLECYCKLALSCLHDDGTQRPSMSQVVGDLEFALQLVVRKGDNQFGTTQKEETLVKIPQFSQFMSDEESDIHFARSHSYKESTASARLNTQNYSFFDIGNQRPRSHSSENLKVYI 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g00459 879 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Vivi6g00459 879 PANTHER OS03G0124300 PROTEIN-RELATED 20 488 IPR046957 GO:0004672
Vivi6g00459 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Vivi6g00459 879 CDD STKc_IRAK 528 795 - -
Vivi6g00459 879 Pfam Protein tyrosine and serine/threonine kinase 528 794 IPR001245 GO:0004672|GO:0006468
Vivi6g00459 879 Pfam Malectin-like domain 44 426 IPR024788 -
Vivi6g00459 879 Gene3D - 37 200 - -
Vivi6g00459 879 Gene3D - 233 427 - -
Vivi6g00459 879 FunFam FERONIA receptor-like kinase 41 200 - -
Vivi6g00459 879 FunFam receptor-like protein kinase FERONIA 485 597 - -
Vivi6g00459 879 ProSiteProfiles Protein kinase domain profile. 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00459 879 Gene3D Phosphorylase Kinase; domain 1 484 597 - -
Vivi6g00459 879 FunFam FERONIA receptor-like kinase 233 427 - -
Vivi6g00459 879 SMART serkin_6 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g00459 879 SUPERFAMILY Protein kinase-like (PK-like) 496 797 IPR011009 -
Vivi6g00459 879 FunFam Receptor-like protein kinase FERONIA 598 817 - -
Vivi6g00459 879 Gene3D Transferase(Phosphotransferase) domain 1 598 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g00459 Vivi-Chr6 12160825 12163730 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g00459 31 810 Receptor kinase-like Gene Family AT3G51550 44.970 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi6g00459 Malectin_like 1.3e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g00459 - - mtr:25497555 1203.35